CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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csin111833
(
Clonorchis sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
csin111833
T152714_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
csin111833
C2H2 ZF
142
165
YRCPSCPAMYANANAFTKHMREKH
csin111833
C2H2 ZF
170
193
YTCRQCEEFFETLSQLFLHARRSH
csin111833
C2H2 ZF
236
258
YVCDVCNKRFAQKANMKTHRNRH
csin111833
C2H2 ZF
265
289
FRCDTCNKAFSSYDIYLAHLRTREH
csin111833
C2H2 ZF
305
326
LECLGCAVTFDSIYNLNKHTRS
csin111833
C2H2 ZF
365
389
ISCPVCGERGFPGFNQLNHHITRAH
csin111833
C2H2 ZF
397
420
HVCRYCESTFEIKRDLDMHIRSMH
Links
Other
C2H2 ZF
family TFs
Other
Clonorchis sinensis
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DILT_0001782101
Diphyllobothrium latum
DILT_0001782101
N
0.774
ECANG7_00876
Echinococcus canadensis
ECANG7_00876
N
0.767
EmuJ_000596600
Echinococcus multilocularis
EmuJ_000596600
N
0.767
D915_08997
Fasciola hepatica
D915_08997
N
0.772
TTAC_0000117301
Hydatigera taeniaeformis
TTAC_0000117301
N
0.774
HDID_0000119801
Hymenolepis diminuta
HDID_0000119801
N
0.760
HmN_000083600
Hymenolepis microstoma
HmN_000083600
N
0.763
HNAJ_0001108601
Hymenolepis nana
HNAJ_0001108601
N
0.763
MCOS_0000608501
Mesocestoides corti
MCOS_0000608501
N
0.774
T265_06698
Opisthorchis viverrini
T265_06698
N
0.827
SSLN_0000095401
Schistocephalus solidus
SSLN_0000095401
N
0.774
SCUD_0000712901
Schistosoma curassoni
SCUD_0000712901
N
0.794
A_02757
Schistosoma haematobium
A_02757
N
0.794
Sjc_0034430
Schistosoma japonicum
Sjc_0034430
N
0.794
Smp_015840
Schistosoma mansoni
Smp_015840
N
0.794
SMRZ_0000566901
Schistosoma margrebowiei
SMRZ_0000566901
N
0.787
SROB_0001916001
Schistosoma rodhaini
SROB_0001916001
N
0.794
TsM_000623000
Taenia solium
TsM_000623000
N
0.767