CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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D917_02953
(
Trichinella nativa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
D917_02953
T152848_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
D917_02953
C2H2 ZF
47
69
YICHICGFSNESKFHFNSHMNTH
D917_02953
C2H2 ZF
72
95
HKCDICDYTSRTEGRLKRHMKQFH
D917_02953
C2H2 ZF
178
200
YRCKQCLFVASSKNDFWIHQRTH
D917_02953
C2H2 ZF
207
229
LACPKCPFITEYKHHLEYHLRNH
D917_02953
C2H2 ZF
235
257
FKCTKCNYSCVNKSMLNSHMKSH
D917_02953
C2H2 ZF
263
287
YRCADCTYATKYCHSLKLHLRKYGH
Links
Other
C2H2 ZF
family TFs
Other
Trichinella nativa
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI072423
Acyrthosiphon pisum
ACYPI072423
N
GB46757
Apis mellifera
GB46757
N
Cflo_08820--XP_624482.2_APIME
Camponotus floridanus
Cflo_08820--XP_624482.2_APIME
N
RPRC000844
Rhodnius prolixus
RPRC000844
N
SMAR008668
Strigamia maritima
SMAR008668
N