CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCOI00479200
(
Haemonchus contortus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
HCOI00479200
T153805_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI00479200.t1
C2H2 ZF
499
522
LECKFCPTTFKDQMELHLHQINQH
HCOI00479200.t1
C2H2 ZF
547
569
LRCRRCQYSTRDSRNLEMHVERH
HCOI00479200.t1
C2H2 ZF
610
633
VKCSLCDARCPDEATLEAHAAVAH
Links
Other
C2H2 ZF
family TFs
Other
Haemonchus contortus
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.supercontig_9.288
Carica papaya
evm.TU.supercontig_9.288
N
Ciclev10021846m.g
Citrus clementina
Ciclev10021846m.g
N
orange1.1g028041m.g
Citrus sinensis
orange1.1g028041m.g
N
POPTR_0007s01920
Populus trichocarpa
POPTR_0007s01920
N
SapurV1A.0834s0170
Salix purpurea
SapurV1A.0834s0170
N
SapurV1A.1078s0020
Salix purpurea
SapurV1A.1078s0020
N
TCM_020033
Theobroma cacao
TCM_020033
N
VIT_05s0102g00390
Vitis vinifera
VIT_05s0102g00390
N