CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCOI01673600
(
Haemonchus contortus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
HCOI01673600
T153859_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI01673600.t1
C2H2 ZF
157
180
HSCDQCSQSFNFQQNLFVHKIVEH
HCOI01673600.t1
C2H2 ZF
223
246
YFCSSCSEEFSYSTLFQRHRRLAH
HCOI01673600.t1
C2H2 ZF
337
359
HACPQCKKIFLRPAELKRHSVVH
HCOI01673600.t1
C2H2 ZF
366
389
WKCMQCESEFSHKAGLESHKKTVH
HCOI01673600.t1
C2H2 ZF
397
420
VTCKICSQTFVKQSNLNRHIKKQH
HCOI01673600.t1
C2H2 ZF
429
452
LDCPECSCVFSSHRTLTRHRRAIH
HCOI01673600.t1
C2H2 ZF
460
482
FRCKTCDRTFLRETQLRRHMVIH
HCOI01673600.t1
C2H2 ZF
491
513
FSCNRCHKRFNLKSTLKLHMDVH
HCOI01673600.t1
C2H2 ZF
527
548
KCPVCMKHLSSRNALRKHMAVH
HCOI01673600.t1
C2H2 ZF
874
896
HKCRTCNAAFSRPSDLVRHIYVH
HCOI01673600.t1
C2H2 ZF
902
924
HVCDTCQRAFRTSSALYAHARTH
HCOI01673600.t1
C2H2 ZF
931
953
FPCVVCGSKFFSKGSLVVHLRIH
HCOI01673600.t2
C2H2 ZF
157
180
HSCDQCSQSFNFQQNLFVHKIVEH
HCOI01673600.t2
C2H2 ZF
223
246
YFCSSCSEEFSYSTLFQRHRRLAH
HCOI01673600.t2
C2H2 ZF
337
359
HACPQCKKIFLRPAELKRHSVVH
HCOI01673600.t2
C2H2 ZF
366
389
WKCMQCESEFSHKAGLESHKKTVH
HCOI01673600.t2
C2H2 ZF
397
420
VTCKICSQTFVKQSNLNRHIKKQH
HCOI01673600.t2
C2H2 ZF
429
452
LDCPECSCVFSSHRTLTRHRRAIH
HCOI01673600.t2
C2H2 ZF
460
482
FRCKTCDRTFLRETQLRRHMVIH
HCOI01673600.t2
C2H2 ZF
491
513
FSCNRCHKRFNLKSTLKLHMDVH
HCOI01673600.t2
C2H2 ZF
527
548
KCPVCMKHLSSRNALRKHMAVH
HCOI01673600.t2
C2H2 ZF
847
869
HKCRTCNAAFSRPSDLVRHIYVH
HCOI01673600.t2
C2H2 ZF
875
897
HVCDTCQRAFRTSSALYAHARTH
HCOI01673600.t2
C2H2 ZF
904
926
FPCVVCGSKFFSKGSLVVHLRIH
HCOI01673600.t3
C2H2 ZF
157
180
HSCDQCSQSFNFQQNLFVHKIVEH
HCOI01673600.t3
C2H2 ZF
223
246
YFCSSCSEEFSYSTLFQRHRRLAH
HCOI01673600.t3
C2H2 ZF
337
359
HACPQCKKIFLRPAELKRHSVVH
HCOI01673600.t3
C2H2 ZF
366
389
WKCMQCESEFSHKAGLESHKKTVH
HCOI01673600.t3
C2H2 ZF
397
420
VTCKICSQTFVKQSNLNRHIKKQH
HCOI01673600.t3
C2H2 ZF
429
452
LDCPECSCVFSSHRTLTRHRRAIH
HCOI01673600.t3
C2H2 ZF
460
482
FRCKTCDRTFLRETQLRRHMVIH
HCOI01673600.t3
C2H2 ZF
491
513
FSCNRCHKRFNLKSTLKLHMDVH
HCOI01673600.t3
C2H2 ZF
527
548
KCPVCMKHLSSRNALRKHMAVH
HCOI01673600.t3
C2H2 ZF
902
924
HKCRTCNAAFSRPSDLVRHIYVH
HCOI01673600.t3
C2H2 ZF
930
952
HVCDTCQRAFRTSSALYAHARTH
HCOI01673600.t3
C2H2 ZF
959
981
FPCVVCGSKFFSKGSLVVHLRIH
Links
Other
C2H2 ZF
family TFs
Other
Haemonchus contortus
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
csin103171
Clonorchis sinensis
csin103171
N
ECANG7_05417
Echinococcus canadensis
ECANG7_05417
N
EmuJ_000136100
Echinococcus multilocularis
EmuJ_000136100
N
D915_07446
Fasciola hepatica
D915_07446
N
HmN_000429600
Hymenolepis microstoma
HmN_000429600
N
HNAJ_0001182201
Hymenolepis nana
HNAJ_0001182201
N
MCOS_0000226901
Mesocestoides corti
MCOS_0000226901
N
T265_02980
Opisthorchis viverrini
T265_02980
N
PXEA_0001764301
Protopolystoma xenopodis
PXEA_0001764301
N
SCUD_0001462101
Schistosoma curassoni
SCUD_0001462101
N
D_00079
Schistosoma haematobium
D_00079
N
Sjc_0069630
Schistosoma japonicum
Sjc_0069630
N
Smp_161860
Schistosoma mansoni
Smp_161860
N
SMTD_0001484301
Schistosoma mattheei
SMTD_0001484301
N
TASK_0000472101
Taenia asiatica
TASK_0000472101
N
TsM_000085600
Taenia solium
TsM_000085600
N
TRE_0000834001
Trichobilharzia regenti
TRE_0000834001
N