HPBE_0001438901 (Heligmosomoides bakeri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 HPBE_0001438901 T154213_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sptf-3
M00632_2.00 		Caenorhabditis elegans
NNMCGCCCMY
RKGGGCGKNN		 PBM
Narasimhan et al.(2015)
pTH9394 		0.820 0.928
Sp1
M00765_2.00 		Mus musculus
NMCGCCCMY
RKGGGCGKN		 PBM
Weirauch et al.(2013)
pTH0978 		0.766 0.768
SP1
M02921_2.00 		Homo sapiens
RCCMCDCCCMH
DKGGGHGKGGY		 SELEX
Jolma et al.(2013)
SP1_1 		0.766 0.768
SP1
M04605_2.00 		Homo sapiens
NWRRCCACGCCCMCH
DGKGGGCGTGGYYWN		 SELEX
Yin et al.(2017)
SP1_eDBD_HT-SELEX 		0.766 0.768
SP1
M08096_2.00 		Homo sapiens
BYCCCKCCCCY
RGGGGMGGGRV		 ChIP-seq
Mathelier et al.(2014)
MA0079.3 		0.766 0.768
SP1
M08363_2.00 		Homo sapiens
CCCHNBCYCCDCCCY
RGGGHGGRGVNDGGG		 ChIP-seq
Schmitges et al.(2016)
P08047.MEME 		0.766 0.768
SP1
M08938_2.00 		Homo sapiens
BCSSSBCCHVGCCCCGCCCCYN
NRGGGGCGGGGCBDGGVSSSGV		 Misc
Kulakovskiy et al.(2013)
SP1_HUMAN.H11MO.0.A 		0.766 0.768
Sp1
M08963_2.00 		Mus musculus
CCCBKCYCCKCCCCCNBCYCSBSC
GSVSGRGVNGGGGGMGGRGMVGGG		 Misc
Kulakovskiy et al.(2013)
SP1_MOUSE.H11MO.0.A 		0.766 0.768
SP1
M10294_2.00 		Homo sapiens
DSCMHGCCYH
DRGGCDKGSH		 Transfac
Matys et al.(2006)
V$SP1_01 		0.766 0.768
SP1
M10295_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_02 		0.766 0.768
SP1
M10296_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_07 		0.766 0.768
SP1
M10297_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_08 		0.766 0.768
SP1
M10298_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_Q2_02 		0.766 0.768
SP1
M10299_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_Q3 		0.766 0.768
SP1
M10300_2.00 		Homo sapiens
VVCCCCGCCCMBN
NVKGGGCGGGGBB		 Transfac
Matys et al.(2006)
V$SP1_Q6 		0.766 0.768
SP1
M04606_2.00 		Homo sapiens
NWRGCCMCGCCCMYH
DRKGGGCGKGGCYWN		 SELEX
Yin et al.(2017)
SP1_eDBD_Methyl-HT-SELEX 		0.766 0.768
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HPBE_0001438901-mRNA-1 C2H2 ZF 159 181
HPBE_0001438901-mRNA-1 C2H2 ZF 187 211
HPBE_0001438901-mRNA-1 C2H2 ZF 217 239

Links

Other C2H2 ZF family TFs
Other Heligmosomoides bakeri TFs

128 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL005892 Aedes aegypti AAEL005892 N
ENSAMEG00000012079 Ailuropoda melanoleuca ENSAMEG00000012079 N
Alligator_sinensis_CCG008692.1 Alligator sinensis Alligator_sinensis_CCG008692.1 N
ZNF367 Anolis carolinensis ENSACAG00000012929 N
AALB010202 Anopheles albimanus AALB010202 N
AATE010533 Anopheles atroparvus AATE010533 N
ACUA017310 Anopheles culicifacies ACUA017310 N
AFAF012856 Anopheles farauti AFAF012856 N
AGAP010516 Anopheles gambiae AGAP010516 N
AMEM011646 Anopheles merus AMEM011646 N
ASTEI07114 Anopheles stephensi ASTEI07114 N
GB46246 Apis mellifera GB46246 N
Afo_R003052 Aptenodytes forsteri Afo_R003052 N
ENSAMXG00000021081 Astyanax mexicanus ENSAMXG00000021081 N
ACEP13151 Atta cephalotes ACEP13151 N
ENSP00000364405-D1 Bos grunniens ENSP00000364405-D1 N
ZNF367 Bos taurus ENSBTAG00000006587 N
estExt_fgenesh2_pg.C_2650031 Branchiostoma floridae estExt_fgenesh2_pg.C_2650031 N
Brh_R010325 Buceros rhinoceros Brh_R010325 N
ZNF367 Callithrix jacchus ENSCJAG00000012580 N
Aan_R014419 Calypte anna Aan_R014419 N
Aan_R012372 Calypte anna Aan_R012372 N
Cflo_01591--XP_624136.2_APIME Camponotus floridanus Cflo_01591--XP_624136.2_APIME N
ZNF367 Canis familiaris ENSCAFG00000001213 N
CapteG227287 Capitella teleta CapteG227287 N
ZNF367 Cavia porcellus ENSCPOG00000001515 N
ENSCSAG00000006700 Chlorocebus sabaeus ENSCSAG00000006700 N
ZNF367 Choloepus hoffmanni ENSCHOG00000008195 N
zf(c2h2)-76 Ciona intestinalis ENSCING00000023622 N
ENSCSAVG00000003922 Ciona savignyi ENSCSAVG00000003922 N
CGI_10028872 Crassostrea gigas CGI_10028872 N
znf367 Danio rerio ENSDARG00000021086 N
DAPPUDRAFT_51670 Daphnia pulex DAPPUDRAFT_51670 N
ZNF367 Dasypus novemcinctus ENSDNOG00000035249 N
YQE_09141 Dendroctonus ponderosae YQE_09141 N
ENSDORG00000010750 Dipodomys ordii ENSDORG00000010750 N
ZNF367 Echinops telfairi ENSETEG00000018547 N
ENSECAG00000009173 Equus caballus ENSECAG00000009173 N
ZNF367 Felis catus ENSFCAG00000015587 N
ENSFALG00000003343 Ficedula albicollis ENSFALG00000003343 N
ENSGMOG00000007617 Gadus morhua ENSGMOG00000007617 N
ZNF367 Gallus gallus ENSGALG00000012629 N
znf367 Gasterosteus aculeatus ENSGACG00000006715 N
Gfo_R009072 Geospiza fortis Gfo_R009072 N
ZNF367 Gorilla gorilla ENSGGOG00000012699 N
ZNF367 Homo sapiens ENSG00000165244 N
ENSSTOG00000005655 Ictidomys tridecemlineatus ENSSTOG00000005655 N
ISCW000539 Ixodes scapularis ISCW000539 N
ENSLACG00000011483 Latimeria chalumnae ENSLACG00000011483 N
ENSLOCG00000009209 Lepisosteus oculatus ENSLOCG00000009209 N
LDEC003543 Leptinotarsa decemlineata LDEC003543 N
LotgiG165679 Lottia gigantea LotgiG165679 N
ZNF367 Loxodonta africana ENSLAFG00000010427 N
ENSP00000364405 Macaca fascicularis ENSP00000364405 N
ZNF367 Macaca mulatta ENSMMUG00000007996 N
ENSMEUG00000009287 Macropus eugenii ENSMEUG00000009287 N
ZNF367 Meleagris gallopavo ENSMGAG00000006781 N
ENSMICG00000002011 Microcebus murinus ENSMICG00000002011 N
ZNF367 Monodelphis domestica ENSMODG00000000499 N
ENSMPUG00000006868 Mustela putorius furo ENSMPUG00000006868 N
Zfp367 Mus musculus ENSMUSG00000044934 N
Myotis_brandtii_Znf367_10015819 Myotis brandtii Myotis_brandtii_Znf367_10015819 N
ZNF367 Myotis lucifugus ENSMLUG00000017279 N
NV15465 Nasonia vitripennis NV15465 N
NEMVEDRAFT_v1g106775 Nematostella vectensis NEMVEDRAFT_v1g106775 N
ENSNLEG00000016813 Nomascus leucogenys ENSNLEG00000016813 N
ENSOPRG00000011725 Ochotona princeps ENSOPRG00000011725 N
ENSONIG00000015208 Oreochromis niloticus ENSONIG00000015208 N
ENSOCUG00000023005 Oryctolagus cuniculus ENSOCUG00000023005 N
znf367 Oryzias latipes ENSORLG00000003923 N
ZNF367 Otolemur garnettii ENSOGAG00000004337 N
ZNF367 Pan troglodytes ENSPTRG00000021153 N
ENSPANG00000024635 Papio anubis ENSPANG00000024635 N
ENSPSIG00000011709 Pelodiscus sinensis ENSPSIG00000011709 N
ENSPFOG00000007837 Poecilia formosa ENSPFOG00000007837 N
Pvit_09074 Pogona vitticeps Pvit_09074 N
ENSPPYG00000019416 Pongo abelii ENSPPYG00000019416 N
ZNF367 Pteropus vampyrus ENSPVAG00000007651 N
Zfp367 Rattus norvegicus ENSRNOG00000027234 N
Sakowv30026002m.g Saccoglossus kowalevskii Sakowv30026002m.g N
SINV17846 Solenopsis invicta SINV17846 N
ZNF367 Sorex araneus ENSSARG00000000827 N
ENSSSCG00000010933 Sus scrofa ENSSSCG00000010933 N
ZNF367 Taeniopygia guttata ENSTGUG00000000513 N
znf367 Takifugu rubripes ENSTRUG00000015325 N
znf367 Tetraodon nigroviridis ENSTNIG00000016674 N
TC016055 Tribolium castaneum TC016055 N
TriadG15889 Trichoplax adhaerens TriadG15889 N
ZNF367 Tupaia belangeri ENSTBEG00000002215 N
Tal_R006948 Tyto alba Tal_R006948 N
ZNF367 Vicugna pacos ENSVPAG00000002182 N
znf367.S Xenopus laevis XB-GENE-986041 N
znf367 Xenopus tropicalis XB-GENE-986040 N
ENSXMAG00000015989 Xiphophorus maculatus ENSXMAG00000015989 N
L798_11919 Zootermopsis nevadensis L798_11919 N