nLs.2.1.2.g05842 (Litomosoides sigmodontis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 nLs.2.1.2.g05842 T155339_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lsy-2
M00615_2.00 		Caenorhabditis elegans
NTACMGTANN
NNTACKGTAN		 PBM
Narasimhan et al.(2015)
pTH10810 		0.781 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t05842-RA C2H2 ZF 65 87
nLs.2.1.2.t05842-RA C2H2 ZF 93 115
nLs.2.1.2.t05842-RA C2H2 ZF 121 143

Links

Other C2H2 ZF family TFs
Other Litomosoides sigmodontis TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_1AL_C6CACDF78 Triticum aestivum Traes_1AL_C6CACDF78 N
Traes_1BL_4CAB28F5F Triticum aestivum Traes_1BL_4CAB28F5F N
Traes_1DL_0CDB6989D Triticum aestivum Traes_1DL_0CDB6989D N
Traes_3AS_D6334436F Triticum aestivum Traes_3AS_D6334436F N
Traes_3DS_31B0043F6 Triticum aestivum Traes_3DS_31B0043F6 N
Traes_6BS_C3247654A Triticum aestivum Traes_6BS_C3247654A N
Traes_7DS_6B1F6F5E5 Triticum aestivum Traes_7DS_6B1F6F5E5 N