CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nRc.2.0.1.g39355
(
Romanomermis culicivorax
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nRc.2.0.1.g39355
T155507_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nRc.2.0.1.t39355-RA
C2H2 ZF
492
516
YQCHWPECLWRFARSDELTRHYRKH
nRc.2.0.1.t39355-RA
C2H2 ZF
522
544
FKCKVCQRGFSRSDHLVLHMKRH
Links
Other
C2H2 ZF
family TFs
Other
Romanomermis culicivorax
TFs
59 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo3g076170
Brassica oleracea
Bo3g076170
N
Bra001801
Brassica rapa
Bra001801
N
Ciclev10017490m.g
Citrus clementina
Ciclev10017490m.g
N
orange1.1g047722m.g
Citrus sinensis
orange1.1g047722m.g
N
Thhalv10022088m.g
Eutrema salsugineum
Thhalv10022088m.g
N
Gorai.009G070200
Gossypium raimondii
Gorai.009G070200
N
POPTR_0003s21770
Populus trichocarpa
POPTR_0003s21770
N
TCM_040387
Theobroma cacao
TCM_040387
N