CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nRc.2.0.1.g45858
(
Romanomermis culicivorax
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nRc.2.0.1.g45858
T155516_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nRc.2.0.1.t45858-RA
C2H2 ZF
234
256
FQCRICLRAFSRSDHLTTHVRTH
nRc.2.0.1.t45858-RA
C2H2 ZF
262
284
FSCEICCRRFARSDERKRHAKVH
Links
Other
C2H2 ZF
family TFs
Other
Romanomermis culicivorax
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOM035432
Anopheles coluzzii
ACOM035432
N
0.822
GF16755
Drosophila ananassae
FBgn0093776
N
0.822
EVEC_0000442401
Enterobius vermicularis
EVEC_0000442401
N
0.792
GPUH_0001779001
Gongylonema pulchrum
GPUH_0001779001
N
0.816
HPBE_0002614201
Heligmosomoides bakeri
HPBE_0002614201
N
0.792
augustus_masked-nMf.1.1.scaf00461-processed-gene-0.2
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf00461-processed-gene-0.2
N
0.763
EGR2
Monodelphis domestica
ENSMODG00000017110
N
0.782
Ogr15639
Ophisaurus gracilis
Ogr15639
N
0.788
nRc.2.0.1.g36729
Romanomermis culicivorax
nRc.2.0.1.g36729
N
0.821
TELCIR_01564
Teladorsagia circumcincta
TELCIR_01564
N
0.816