CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMTD_0000098501
(
Schistosoma mattheei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMTD_0000098501
T156331_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMTD_0000098501-mRNA-1
C2H2 ZF
14
38
SVCGCGVCGREFGMRCRLIAHTRRH
SMTD_0000098501-mRNA-1
C2H2 ZF
44
66
FPCADCGRAFSDRGNLQRHRYTH
SMTD_0000098501-mRNA-1
C2H2 ZF
72
94
FHCTVCGKSFRQASCLSNHRRFH
SMTD_0000098501-mRNA-1
C2H2 ZF
102
124
PCPFCQRSFRSSSSLQMHIRWKH
SMTD_0000098501-mRNA-1
C2H2 ZF
300
322
YPCPACPRRFAFQCRLAAHLRCH
SMTD_0000098501-mRNA-1
C2H2 ZF
328
350
FICIDCGRAFTQRGYLVRHAAVH
SMTD_0000098501-mRNA-1
C2H2 ZF
356
378
FSCGLCDRSYKHYGSLVNHRRTH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma mattheei
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
csin109351
Clonorchis sinensis
csin109351
N
0.817
T265_09196
Opisthorchis viverrini
T265_09196
N
0.817
A_01693
Schistosoma haematobium
A_01693
N
0.822
Sjc_0023710
Schistosoma japonicum
Sjc_0023710
N
0.827