CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SROB_0001026801
(
Schistosoma rodhaini
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SROB_0001026801
T156928_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SROB_0001026801-mRNA-1
C2H2 ZF
326
348
FQCMTCSRSFSVKAGLVQHMRTH
SROB_0001026801-mRNA-1
C2H2 ZF
354
376
YPCIHCGRAFKQKIQLTTHMRVH
SROB_0001026801-mRNA-1
C2H2 ZF
382
404
YGCRLCGKLFRQQSHVVQHLRTH
SROB_0001026801-mRNA-1
C2H2 ZF
410
431
HKCYQCGKAFRQKYSLISHQRR
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma rodhaini
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
csin101334
Clonorchis sinensis
csin101334
N
0.822
ECANG7_03033
Echinococcus canadensis
ECANG7_03033
N
0.789
EmuJ_000794400
Echinococcus multilocularis
EmuJ_000794400
N
0.789
ECPE_0000854101
Echinostoma caproni
ECPE_0000854101
N
0.810
D915_00188
Fasciola hepatica
D915_00188
N
0.810
TTAC_0000817801
Hydatigera taeniaeformis
TTAC_0000817801
N
0.789
HmN_000433700
Hymenolepis microstoma
HmN_000433700
N
0.789
MCOS_0000732201
Mesocestoides corti
MCOS_0000732201
N
0.789
SSLN_0001061401
Schistocephalus solidus
SSLN_0001061401
N
0.801
SCUD_0001625901
Schistosoma curassoni
SCUD_0001625901
N
0.825
A_07004
Schistosoma haematobium
A_07004
N
0.825
Sjc_0089400
Schistosoma japonicum
Sjc_0089400
N
0.815
Smp_009070
Schistosoma mansoni
Smp_009070
N
0.827
SMRZ_0001969501
Schistosoma margrebowiei
SMRZ_0001969501
N
0.825
SMTD_0001503701
Schistosoma mattheei
SMTD_0001503701
N
0.825
TASK_0000535101
Taenia asiatica
TASK_0000535101
N
0.789
TsM_000286000
Taenia solium
TsM_000286000
N
0.789