CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SSLN_0000541701
(
Schistocephalus solidus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SSLN_0000541701
T157076_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SSLN_0000541701-mRNA-1
C2H2 ZF
223
244
LRCEECGKYYRNEYSLHHHICL
SSLN_0000541701-mRNA-1
C2H2 ZF
266
288
YFCPACNKPFKWLGNLTRHYYVH
SSLN_0000541701-mRNA-1
C2H2 ZF
294
316
FKCDICQKEFFSAYQVKRHMNSH
SSLN_0000541701-mRNA-1
C2H2 ZF
321
343
FNCEVCDKPFTCKYACAWHMRQH
Links
Other
C2H2 ZF
family TFs
Other
Schistocephalus solidus
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
csin102882
Clonorchis sinensis
csin102882
N
0.807
DILT_0001834001
Diphyllobothrium latum
DILT_0001834001
N
0.817
MCOS_0000094901
Mesocestoides corti
MCOS_0000094901
N
0.800
T265_00597
Opisthorchis viverrini
T265_00597
N
0.807
SCUD_0000248101
Schistosoma curassoni
SCUD_0000248101
N
0.780
A_06517
Schistosoma haematobium
A_06517
N
0.780
Smp_074040
Schistosoma mansoni
Smp_074040
N
0.780
SMRZ_0000029401
Schistosoma margrebowiei
SMRZ_0000029401
N
0.780
SROB_0001680401
Schistosoma rodhaini
SROB_0001680401
N
0.780
SPER_0003755301
Spirometra erinaceieuropaei
SPER_0003755301
N
0.827