CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SSLN_0001061401
(
Schistocephalus solidus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SSLN_0001061401
T157154_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SSLN_0001061401-mRNA-1
C2H2 ZF
393
415
YQCATCSRSFAVKAGLMQHLRTH
SSLN_0001061401-mRNA-1
C2H2 ZF
421
443
YPCPECGRAFKQKIQLTTHMRVH
SSLN_0001061401-mRNA-1
C2H2 ZF
449
471
YGCRICGKLFRQQSHVVQHLRTH
SSLN_0001061401-mRNA-1
C2H2 ZF
477
498
HKCGRCNKAFRQKYSLISHQRR
Links
Other
C2H2 ZF
family TFs
Other
Schistocephalus solidus
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
csin101334
Clonorchis sinensis
csin101334
N
0.801
ECANG7_03033
Echinococcus canadensis
ECANG7_03033
N
0.810
EmuJ_000794400
Echinococcus multilocularis
EmuJ_000794400
N
0.810
ECPE_0000854101
Echinostoma caproni
ECPE_0000854101
N
0.789
D915_00188
Fasciola hepatica
D915_00188
N
0.789
TTAC_0000817801
Hydatigera taeniaeformis
TTAC_0000817801
N
0.810
HmN_000433700
Hymenolepis microstoma
HmN_000433700
N
0.813
MCOS_0000732201
Mesocestoides corti
MCOS_0000732201
N
0.810
SCUD_0001625901
Schistosoma curassoni
SCUD_0001625901
N
0.801
A_07004
Schistosoma haematobium
A_07004
N
0.801
Sjc_0089400
Schistosoma japonicum
Sjc_0089400
N
0.789
Smp_009070
Schistosoma mansoni
Smp_009070
N
0.801
SMRZ_0001969501
Schistosoma margrebowiei
SMRZ_0001969501
N
0.801
SMTD_0001503701
Schistosoma mattheei
SMTD_0001503701
N
0.801
SROB_0001026801
Schistosoma rodhaini
SROB_0001026801
N
0.801
TASK_0000535101
Taenia asiatica
TASK_0000535101
N
0.810
TsM_000286000
Taenia solium
TsM_000286000
N
0.810