CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRE_0000291701
(
Trichobilharzia regenti
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
TRE_0000291701
T157960_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FEZF1
M08307_2.00
Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN
ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE
0.761
0.826
FEZF1
M08889_2.00
Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH
Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C
0.761
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRE_0000291701-mRNA-1
C2H2 ZF
191
213
YTCPECGKVFTAHYNLTRHMPIH
TRE_0000291701-mRNA-1
C2H2 ZF
219
241
FICKVCNKGFRQASTLCRHKIIH
TRE_0000291701-mRNA-1
C2H2 ZF
247
269
HICWVCGKAFNRSSTLNTHSRIH
TRE_0000291701-mRNA-1
C2H2 ZF
275
297
FTCEICGKGFHQKGNYKNHKLTH
TRE_0000291701-mRNA-1
C2H2 ZF
303
325
YKCHICHKAFHQIYNLSFHMHTH
TRE_0000291701-mRNA-1
C2H2 ZF
331
354
YICTICDKGFCRNFDLKKHIRKLH
Links
Other
C2H2 ZF
family TFs
Other
Trichobilharzia regenti
TFs
139 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy