CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRE_0000400601
(
Trichobilharzia regenti
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
TRE_0000400601
T157969_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRE_0000400601-mRNA-1
C2H2 ZF
498
521
FPCNQCKEEFPSLHTLEQHTLGQH
TRE_0000400601-mRNA-1
C2H2 ZF
524
546
YRCHICRAQFTQRSNLQRHALKH
TRE_0000400601-mRNA-1
C2H2 ZF
552
575
FECRVCSKAYYRKDHLMRHMEMGH
Links
Other
C2H2 ZF
family TFs
Other
Trichobilharzia regenti
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
csin106650
Clonorchis sinensis
csin106650
N
0.768
ECPE_0001475101
Echinostoma caproni
ECPE_0001475101
N
0.768
D915_05028
Fasciola hepatica
D915_05028
N
0.768
T265_14414
Opisthorchis viverrini
T265_14414
N
0.768
SCUD_0000153201
Schistosoma curassoni
SCUD_0000153201
N
0.821
A_03247
Schistosoma haematobium
A_03247
N
0.821
Sjc_0102400
Schistosoma japonicum
Sjc_0102400
N
0.821
Smp_145470
Schistosoma mansoni
Smp_145470
N
0.821