TTRE_0000385401 (Trichuris trichiura)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 TTRE_0000385401 T158249_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sens-2
M06165_2.00 		Drosophila melanogaster
RYAAATCWSDGCAYNC
GNRTGCHSWGATTTRY		 B1H
Zhu et al.(2011)
sens-2_SANGER_2.5_FBgn0051632 		0.762 0.775
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TTRE_0000385401 C2H2 ZF 135 158
TTRE_0000385401 C2H2 ZF 164 186
TTRE_0000385401 C2H2 ZF 192 214
TTRE_0000385401 C2H2 ZF 220 242
TTRE_0000385401 C2H2 ZF 248 270
TTRE_0000385401 C2H2 ZF 276 299

Links

Other C2H2 ZF family TFs
Other Trichuris trichiura TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GF15430 Drosophila ananassae FBgn0092455 I 0.762
GG10437 Drosophila erecta FBgn0102746 I 0.762
GH13715 Drosophila grimshawi FBgn0121191 I 0.762
sens-2 Drosophila melanogaster FBgn0051632 D 0.762
GI23984 Drosophila mojavensis FBgn0146708 I 0.762
GL26188 Drosophila persimilis FBgn0163770 I 0.762
GA16348 Drosophila pseudoobscura FBgn0076363 I 0.762
GM16223 Drosophila sechellia FBgn0171139 I 0.762
GJ21268 Drosophila virilis FBgn0208401 I 0.762
GK24242 Drosophila willistoni FBgn0226203 I 0.762
GE14143 Drosophila yakuba FBgn0231766 I 0.762
MDOA011065 Musca domestica MDOA011065 I 0.762
GFI1B Ornithorhynchus anatinus ENSOANG00000014723 I 0.757
tetur16g01570 Tetranychus urticae tetur16g01570 I 0.762
D917_04525 Trichinella nativa D917_04525 N 0.756
TMUE_s0128002800 Trichuris muris TMUE_s0128002800 I 0.807
D918_06477 Trichuris suis D918_06477 I 0.827