CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30043999m.g
(
Saccoglossus kowalevskii
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01530 (zf-C2HC)
IPR002515
Sakowv30043999m.g
T159502_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23950417_peptide
C2HC ZF
726
755
GCPTPGCKGIGHIKGAKYTGHHSAFGCPYS
23950417_peptide
C2HC ZF
810
838
KCPTPGCDGSGHVTGKYTAHHRVSGCPLA
23950418_peptide
C2HC ZF
726
755
GCPTPGCKGIGHIKGAKYTGHHSAFGCPYS
23950419_peptide
C2HC ZF
726
755
GCPTPGCKGIGHIKGAKYTGHHSAFGCPYS
Links
Other
C2HC ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
77 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000006857
Ailuropoda melanoleuca
ENSAMEG00000006857
N
0.828
ENSAPLG00000011121
Anas platyrhynchos
ENSAPLG00000011121
N
0.724
L3MBTL3
Anolis carolinensis
ENSACAG00000014140
N
0.724
GB44912
Apis mellifera
GB44912
N
0.724
ENSAMXG00000010244
Astyanax mexicanus
ENSAMXG00000010244
N
0.828
ENSAMXG00000018187
Astyanax mexicanus
ENSAMXG00000018187
N
0.931
BGLB002717
Biomphalaria glabrata
BGLB002717
N
0.879
estExt_fgenesh2_pg.C_1230031
Branchiostoma floridae
estExt_fgenesh2_pg.C_1230031
N
0.966
Brh_R012356
Buceros rhinoceros
Brh_R012356
N
0.745
L3MBTL4
Callithrix jacchus
ENSCJAG00000015716
N
0.828
Aan_R003320
Calypte anna
Aan_R003320
N
0.745
L3MBTL4
Canis familiaris
ENSCAFG00000018588
N
0.828
CapteG161824
Capitella teleta
CapteG161824
N
0.931
ENSCSAG00000017582
Chlorocebus sabaeus
ENSCSAG00000017582
N
0.828
L3MBTL4
Choloepus hoffmanni
ENSCHOG00000003637
N
0.828
ENSCING00000004084
Ciona intestinalis
ENSCING00000004084
N
0.724
CGI_10026935
Crassostrea gigas
CGI_10026935
N
0.879
l3mbtl3
Danio rerio
ENSDARG00000025983
N
0.793
L3MBTL4
Danio rerio
ENSDARG00000094780
N
0.931
L3MBTL4
Dasypus novemcinctus
ENSDNOG00000006559
N
0.828
L3mbtl4
Dipodomys ordii
ENSDORG00000013048
N
0.828
L3MBTL4
Erinaceus europaeus
ENSEEUG00000009625
N
0.762
L3MBTL4
Felis catus
ENSFCAG00000031842
N
0.828
ENSFALG00000011622
Ficedula albicollis
ENSFALG00000011622
N
0.724
ENSGMOG00000012699
Gadus morhua
ENSGMOG00000012699
N
0.862
ENSGALG00000000983
Gallus gallus
ENSGALG00000000983
N
0.745
L3MBTL4
Gasterosteus aculeatus
ENSGACG00000001138
N
0.862
Gfo_R016211
Geospiza fortis
Gfo_R016211
N
0.724
Gfo_R014039
Geospiza fortis
Gfo_R014039
N
0.725
L3MBTL4
Gorilla gorilla
ENSGGOG00000015056
N
0.828
L3MBTL4
Homo sapiens
ENSG00000154655
N
0.828
XP_002170161.1
Hydra magnipapillata
XP_002170161.1
N
0.724
ENSLACG00000003590
Latimeria chalumnae
ENSLACG00000003590
N
0.745
ENSLACG00000022431
Latimeria chalumnae
ENSLACG00000022431
N
0.897
ENSLOCG00000003008
Lepisosteus oculatus
ENSLOCG00000003008
N
0.862
ENSLOCG00000017277
Lepisosteus oculatus
ENSLOCG00000017277
N
0.862
LotgiG216594
Lottia gigantea
LotgiG216594
N
0.931
ENSP00000382976
Macaca fascicularis
ENSP00000382976
N
0.828
L3MBTL4
Macaca mulatta
ENSMMUG00000016302
N
0.828
ENSMEUG00000009268
Macropus eugenii
ENSMEUG00000009268
N
0.762
ENSMEUG00000014341
Macropus eugenii
ENSMEUG00000014341
N
0.724
L3MBTL1
Meleagris gallopavo
ENSMGAG00000000827
N
0.745
L3MBTL4
Microcebus murinus
ENSMICG00000015626
N
0.828
L3MBTL3
Monodelphis domestica
ENSMODG00000017623
N
0.724
L3MBTL4
Monodelphis domestica
ENSMODG00000021457
N
0.759
ENSMPUG00000004964
Mustela putorius furo
ENSMPUG00000004964
N
0.828
L3mbtl4
Mus musculus
ENSMUSG00000041565
N
0.828
Myotis_brandtii_L3MBTL4_10019905
Myotis brandtii
Myotis_brandtii_L3MBTL4_10019905
N
0.828
L3MBTL4
Myotis lucifugus
ENSMLUG00000002011
N
0.828
NEMVEDRAFT_v1g20650
Nematostella vectensis
NEMVEDRAFT_v1g20650
N
0.828
NEMVEDRAFT_v1g187589
Nematostella vectensis
NEMVEDRAFT_v1g187589
N
0.828
ENSNLEG00000006925
Nomascus leucogenys
ENSNLEG00000006925
N
0.828
ENSONIG00000015120
Oreochromis niloticus
ENSONIG00000015120
N
0.897
L3MBTL4
Oryctolagus cuniculus
ENSOCUG00000013013
N
0.828
ENSORLG00000019825
Oryzias latipes
ENSORLG00000019825
N
0.862
L3MBTL4
Otolemur garnettii
ENSOGAG00000006203
N
0.793
L3MBTL4
Pan troglodytes
ENSPTRG00000009845
N
0.828
ENSPANG00000008894
Papio anubis
ENSPANG00000008894
N
0.828
ENSPMAG00000002300
Petromyzon marinus
ENSPMAG00000002300
N
0.828
ENSPFOG00000009224
Poecilia formosa
ENSPFOG00000009224
N
0.862
Pvit_01718
Pogona vitticeps
Pvit_01718
N
0.759
ENSPPYG00000009022
Pongo abelii
ENSPPYG00000009022
N
0.828
L3MBTL4
Pteropus vampyrus
ENSPVAG00000002970
N
0.828
L3mbtl4
Rattus norvegicus
ENSRNOG00000025273
N
0.828
ENSSHAG00000017557
Sarcophilus harrisii
ENSSHAG00000017557
N
0.724
ENSSHAG00000012679
Sarcophilus harrisii
ENSSHAG00000012679
N
0.759
L3MBTL4
Sorex araneus
ENSSARG00000006794
N
0.828
SMAR015290
Strigamia maritima
SMAR015290
N
0.897
SPU_021123
Strongylocentrotus purpuratus
SPU_021123
N
0.897
L3MBTL3
Taeniopygia guttata
ENSTGUG00000011709
N
0.724
L3MBTL4
Takifugu rubripes
ENSTRUG00000001294
N
0.828
ENSTSYG00000003474
Tarsius syrichta
ENSTSYG00000003474
N
0.793
L3MBTL4
Tetraodon nigroviridis
ENSTNIG00000004386
N
0.793
L3MBTL4
Tursiops truncatus
ENSTTRG00000012966
N
0.828
Tal_R013237
Tyto alba
Tal_R013237
N
0.725
ENSXMAG00000014347
Xiphophorus maculatus
ENSXMAG00000014347
N
0.862