CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMTD_0000035501
(
Schistosoma mattheei
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01530 (zf-C2HC)
IPR002515
SMTD_0000035501
T159676_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMTD_0000035501-mRNA-1
C2HC ZF
23
52
GCPTPGCKGYGHIKGPRYFSHQRISGCPYA
Links
Other
C2HC ZF
family TFs
Other
Schistosoma mattheei
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
csin100700
Clonorchis sinensis
csin100700
N
0.793
ENSLACG00000022431
Latimeria chalumnae
ENSLACG00000022431
N
0.724
ENSLOCG00000017277
Lepisosteus oculatus
ENSLOCG00000017277
N
0.724
SCUD_0002036501
Schistosoma curassoni
SCUD_0002036501
N
1.000
A_01811
Schistosoma haematobium
A_01811
N
1.000
Sjc_0129040
Schistosoma japonicum
Sjc_0129040
N
1.000
Smp_159100
Schistosoma mansoni
Smp_159100
N
1.000
SROB_0001830201
Schistosoma rodhaini
SROB_0001830201
N
1.000
SMU15036668
Schmidtea mediterranea
SMU15036668
N
0.759
TRE_0001023901
Trichobilharzia regenti
TRE_0001023901
N
0.897