CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Kpol_507p12
(
Vanderwaltozyma polyspora
)
CBF/NF-Y
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02045 (CBFB_NFYA)
IPR001289
Kpol_507p12
T160092_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HAP2
M08452_2.00
Saccharomyces cerevisiae
TTGGH
DCCAA
COMPILED
Mathelier et al.(2014)
MA0313.1
0.946
0.946
NFYA
M08104_2.00
Homo sapiens
NSTGATTGGYB
VRCCAATCASN
ChIP-seq
Mathelier et al.(2014)
MA0060.3
0.732
0.732
NFYA
M09018_2.00
Homo sapiens
YKBYSATTGGYYRV
BYRRCCAATSRVMR
Misc
Kulakovskiy et al.(2013)
NFYA_HUMAN.H11MO.0.A
0.732
0.732
Nfya
M09019_2.00
Mus musculus
YKBYSATTGGYYRV
BYRRCCAATSRVMR
Misc
Kulakovskiy et al.(2013)
NFYA_MOUSE.H11MO.0.A
0.732
0.732
NFYA
M10403_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFYA_02
0.732
0.732
NFYA
M10404_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFYA_Q5
0.732
0.732
NFYA
M10405_2.00
Homo sapiens
NYTGATTGGYTAVH
DBTARCCAATCARN
Transfac
Matys et al.(2006)
V$NFY_C
0.732
0.732
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDO15850
CBF/NF-Y
219
274
QPFYVNAKQYYRILKRRYARAKLEENLKISRERKPYLHESRHKHAMRRPRGQGGRF
Links
Other
CBF/NF-Y
family TFs
Other
Vanderwaltozyma polyspora
TFs
416 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART10G09840
Oryza barthii
OBART10G09840
N
OBART10G09860
Oryza barthii
OBART10G09860
N
OB10G17690
Oryza brachyantha
OB10G17690
N
OGLUM10G09720
Oryza glumaepatula
OGLUM10G09720
N
BGIOSGA032901
Oryza indica
BGIOSGA032901
N
OLONG_014467
Oryza longistaminata
OLONG_014467
N
OMERI10G07220
Oryza meridionalis
OMERI10G07220
N
ONIVA10G09250
Oryza nivara
ONIVA10G09250
N
OPUNC07G15160
Oryza punctata
OPUNC07G15160
N
ORUFI10G10340
Oryza rufipogon
ORUFI10G10340
N
ORUFI10G10360
Oryza rufipogon
ORUFI10G10360
N
OS10G0413700
Oryza sativa
OS10G0413700
N
OS10G0414000
Oryza sativa
OS10G0414000
N