Sakowv30001860m.g (Saccoglossus kowalevskii)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02045 (CBFB_NFYA) IPR001289 Sakowv30001860m.g T160617_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFYA
M08104_2.00 		Homo sapiens
NSTGATTGGYB
VRCCAATCASN		 ChIP-seq
Mathelier et al.(2014)
MA0060.3 		0.911 0.911
NFYA
M09018_2.00 		Homo sapiens
YKBYSATTGGYYRV
BYRRCCAATSRVMR		 Misc
Kulakovskiy et al.(2013)
NFYA_HUMAN.H11MO.0.A 		0.911 0.911
Nfya
M09019_2.00 		Mus musculus
YKBYSATTGGYYRV
BYRRCCAATSRVMR		 Misc
Kulakovskiy et al.(2013)
NFYA_MOUSE.H11MO.0.A 		0.911 0.911
NFYA
M10403_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFYA_02 		0.911 0.911
NFYA
M10404_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFYA_Q5 		0.911 0.911
NFYA
M10405_2.00 		Homo sapiens
NYTGATTGGYTAVH
DBTARCCAATCARN		 Transfac
Matys et al.(2006)
V$NFY_C 		0.911 0.911
HAP2
M08452_2.00 		Saccharomyces cerevisiae
TTGGH
DCCAA		 COMPILED
Mathelier et al.(2014)
MA0313.1 		0.750 0.750
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23918825_peptide CBF/NF-Y 244 299
23918826_peptide CBF/NF-Y 244 299
23918827_peptide CBF/NF-Y 243 298
23918828_peptide CBF/NF-Y 241 296
23918829_peptide CBF/NF-Y 241 296
23918830_peptide CBF/NF-Y 240 295
23918831_peptide CBF/NF-Y 240 295
23918832_peptide CBF/NF-Y 192 247

Links

Other CBF/NF-Y family TFs
Other Saccoglossus kowalevskii TFs

683 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_150877 Agaricus bisporus AGABI2DRAFT_150877 N
BOTBODRAFT_99872 Botryobasidium botryosum BOTBODRAFT_99872 N
CERSUDRAFT_119121 Ceriporiopsis subvermispora CERSUDRAFT_119121 N
CC1G_09335 Coprinopsis cinerea CC1G_09335 N
DACRYDRAFT_114563 Dacryopinax sp DACRYDRAFT_114563 N
FOMPIDRAFT_1034579 Fomitopsis pinicola FOMPIDRAFT_1034579 N
GALMADRAFT_97916 Galerina marginata GALMADRAFT_97916 N
GLOTRDRAFT_120398 Gloeophyllum trabeum GLOTRDRAFT_120398 N
M413DRAFT_446301 Hebeloma cylindrosporum M413DRAFT_446301 N
estExt_fgenesh2_pm.C_30290 Heterobasidion annosum estExt_fgenesh2_pm.C_30290 N
HETIRDRAFT_476261 Heterobasidion irregulare HETIRDRAFT_476261 N
JAAARDRAFT_35324 Jaapia argillacea JAAARDRAFT_35324 N
K443DRAFT_662219 Laccaria amethystina K443DRAFT_662219 N
LACBIDRAFT_313642 Laccaria bicolor LACBIDRAFT_313642 N
Moror_6251 Moniliophthora roreri Moror_6251 N
PAXRUDRAFT_825716 Paxillus rubicundulus PAXRUDRAFT_825716 N
PHACADRAFT_174788 Phanerochaete carnosa PHACADRAFT_174788 N
PHLGIDRAFT_99458 Phlebiopsis gigantea PHLGIDRAFT_99458 N
PILCRDRAFT_824046 Piloderma croceum PILCRDRAFT_824046 N
PISMIDRAFT_28197 Pisolithus microcarpus PISMIDRAFT_28197 N
M404DRAFT_995995 Pisolithus tinctorius M404DRAFT_995995 N
PLEOSDRAFT_1112903 Pleurotus ostreatus PLEOSDRAFT_1112903 N
POSPLDRAFT_104953 Postia placenta POSPLDRAFT_104953 N
V565_091980 Rhizoctonia solani V565_091980 N
SCHCODRAFT_83015 Schizophyllum commune SCHCODRAFT_83015 N
SCLCIDRAFT_13363 Scleroderma citrinum SCLCIDRAFT_13363 N
M408DRAFT_328654 Serendipita vermifera M408DRAFT_328654 N
SERLA73DRAFT_122259 Serpula lacrymans SERLA73DRAFT_122259 N
M422DRAFT_173033 Sphaerobolus stellatus M422DRAFT_173033 N
CY34DRAFT_468895 Suillus luteus CY34DRAFT_468895 N
M407DRAFT_20239 Tulasnella calospora M407DRAFT_20239 N