Gorai.008G091800 (Gossypium raimondii)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03859 (CG-1) IPR005559 Gorai.008G091800 T163538_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CAMTA5
M06827_2.00 		Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN
NACRCGBNDHNNACRCBN		 Dap-seq
OMalley et al.(2016)
CAMTA5_col_a 		0.885 0.885
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.008G091800.1 CG-1 1 79

Links

Other CG-1 family TFs
Other Gossypium raimondii TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_003_00568 Aquilegia coerulea Aquca_003_00568 I 0.808
fgenesh1_pg.C_scaffold_7002321 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7002321 I 0.885
CAMTA5 Arabidopsis thaliana AT4G16150 D 0.885
AT3G16940 Arabidopsis thaliana AT3G16940 I 0.808
Bra038040 Brassica rapa Bra038040 I 0.872
evm.TU.supercontig_929.1 Carica papaya evm.TU.supercontig_929.1 I 0.846
Ciclev10004273m.g Citrus clementina Ciclev10004273m.g I 0.846
orange1.1g002476m.g Citrus sinensis orange1.1g002476m.g I 0.846
Cucsa.325250 Cucumis sativus Cucsa.325250 I 0.846
Thhalv10024342m.g Eutrema salsugineum Thhalv10024342m.g I 0.885
GLYMA07G37090 Glycine max GLYMA07G37090 I 0.859
GLYMA17G03510 Glycine max GLYMA17G03510 I 0.846
Gorai.012G074000 Gossypium raimondii Gorai.012G074000 I 0.936
Gorai.011G198600 Gossypium raimondii Gorai.011G198600 I 0.789
Gorai.004G075100 Gossypium raimondii Gorai.004G075100 I 0.845
Lus10041126.g Linum usitatissimum Lus10041126.g I 0.756
chr4.CM0429.140.nd Lotus japonicus chr4.CM0429.140.nd I 0.859
MDP0000164873 Malus domestica MDP0000164873 I 0.859
MDP0000167705 Malus domestica MDP0000167705 I 0.859
MDP0000233860 Malus domestica MDP0000233860 I 0.859
mgf013655m Mimulus guttatus mgf013655m I 0.705
mgf012030m Mimulus guttatus mgf012030m I 0.872
POPTR_0008s10730 Populus trichocarpa POPTR_0008s10730 I 0.821
SapurV1A.0050s0650 Salix purpurea SapurV1A.0050s0650 I 0.846
Sb02g033620 Sorghum bicolor Sb02g033620 I 0.718
TCM_021327 Theobroma cacao TCM_021327 I 0.846
Traes_2AS_4C4190DEB Triticum aestivum Traes_2AS_4C4190DEB I 0.744
GRMZM2G032336 Zea mays GRMZM2G032336 I 0.718