CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GNLVRS01_PISO0B06205g
(
Millerozyma farinosa
)
Copper fist
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00649 (Copper-fist)
IPR001083
GNLVRS01_PISO0B06205g
T163850_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HAA1
M08553_2.00
Saccharomyces cerevisiae
SMGGSG
CSCCKS
Misc
DeBoer et al.(2011)
YPR008W_1425
0.872
0.872
CUP2
M08549_2.00
Saccharomyces cerevisiae
TCTTTTGCTG
CAGCAAAAGA
Misc
DeBoer et al.(2011)
YGL166W_48.1
0.744
0.744
CUP2
M08550_2.00
Saccharomyces cerevisiae
TCTTTTTGCTG
CAGCAAAAAGA
Misc
DeBoer et al.(2011)
YGL166W_48.2
0.744
0.744
CUP2
M08551_2.00
Saccharomyces cerevisiae
TCTTTTTTGCTG
CAGCAAAAAAGA
Misc
DeBoer et al.(2011)
YGL166W_48.3
0.744
0.744
CUP2
M10408_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CUP2_Q4
0.744
0.744
CUP2
M08453_2.00
Saccharomyces cerevisiae
CWTTTYYGCTG
CAGCRRAAAWG
COMPILED
Mathelier et al.(2014)
MA0287.1
0.744
0.744
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCE73262
Copper fist
2
40
VFINGVKYACERCIRGHRVTTCTHTDQPLTMIKPKGRPA
Links
Other
Copper fist
family TFs
Other
Millerozyma farinosa
TFs
57 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw1.00168.63.1
Aspergillus carbonarius
e_gw1.00168.63.1
I
0.000
ACLA_058700
Aspergillus clavatus
CADACLAG00005706
I
0.000
EURHEDRAFT_454642
Aspergillus ruber
EURHEDRAFT_454642
I
0.000
COCC4DRAFT_54743
Bipolaris maydis
COCC4DRAFT_54743
I
0.000
COCMIDRAFT_8447
Bipolaris oryzae
COCMIDRAFT_8447
I
0.000
COCSADRAFT_27300
Bipolaris sorokiniana
COCSADRAFT_27300
I
0.000
COCVIDRAFT_17560
Bipolaris victoriae
COCVIDRAFT_17560
I
0.000
COCCADRAFT_8876
Bipolaris zeicola
COCCADRAFT_8876
I
0.000
Bcin15g02950
Botrytis cinerea
Bcin15g02950
I
0.000
HMPREF1120_07579
Exophiala dermatitidis
HMPREF1120_07579
I
0.000
LEMA_P029230.1
Leptosphaeria maculans
LEMA_P029230.1
N
0.000
NFIA_098020
Neosartorya fischeri
CADNFIAG00009187
I
0.000
Pc20g11250
Penicillium chrysogenum
Pc20g11250
I
0.000
PITC_059030
Penicillium italicum
PITC_059030
I
0.000
PCH_Pc20g11250
Penicillium rubens
PCH_Pc20g11250
I
0.000
U727_0043425051
Penicillium solitum
U727_0043425051
I
0.000
PTT_08641
Pyrenophora teres
PTT_08641
N
0.000
PTRG_07912
Pyrenophora triticirepentis
PTRG_07912
N
0.000
SETTUDRAFT_159896
Setosphaeria turcica
SETTUDRAFT_159896
N
0.000
SEPMUDRAFT_35926
Sphaerulina musiva
SEPMUDRAFT_35926
N
0.000
PV09_04934
Verruconis gallopava
PV09_04934
N
0.000