CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SKUD_166403
(
Saccharomyces kudriavzevii
)
Copper fist
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00649 (Copper-fist)
IPR001083
SKUD_166403
T164069_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HAA1
M08553_2.00
Saccharomyces cerevisiae
SMGGSG
CSCCKS
Misc
DeBoer et al.(2011)
YPR008W_1425
1.000
1.000
CUP2
M08549_2.00
Saccharomyces cerevisiae
TCTTTTGCTG
CAGCAAAAGA
Misc
DeBoer et al.(2011)
YGL166W_48.1
0.718
0.718
CUP2
M08550_2.00
Saccharomyces cerevisiae
TCTTTTTGCTG
CAGCAAAAAGA
Misc
DeBoer et al.(2011)
YGL166W_48.2
0.718
0.718
CUP2
M08551_2.00
Saccharomyces cerevisiae
TCTTTTTTGCTG
CAGCAAAAAAGA
Misc
DeBoer et al.(2011)
YGL166W_48.3
0.718
0.718
CUP2
M10408_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CUP2_Q4
0.718
0.718
CUP2
M08453_2.00
Saccharomyces cerevisiae
CWTTTYYGCTG
CAGCRRAAAWG
COMPILED
Mathelier et al.(2014)
MA0287.1
0.718
0.718
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EJT43540
Copper fist
2
40
VLINGIKYACERCIRGHRVTTCNHTDQPLMMIKPKGRPS
Links
Other
Copper fist
family TFs
Other
Saccharomyces kudriavzevii
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0012s02040
Populus trichocarpa
POPTR_0012s02040
N
POPTR_0012s02070
Populus trichocarpa
POPTR_0012s02070
N
SapurV1A.0174s0210
Salix purpurea
SapurV1A.0174s0210
N
SapurV1A.2031s0010
Salix purpurea
SapurV1A.2031s0010
N
SapurV1A.4391s0010
Salix purpurea
SapurV1A.4391s0010
N