CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Scas_Contig710.11
(
Saccharomyces castellii
)
Copper fist
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00649 (Copper-fist)
IPR001083
Scas_Contig710.11
T164175_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HAA1
M08553_2.00
Saccharomyces cerevisiae
SMGGSG
CSCCKS
Misc
DeBoer et al.(2011)
YPR008W_1425
0.974
0.974
CUP2
M08549_2.00
Saccharomyces cerevisiae
TCTTTTGCTG
CAGCAAAAGA
Misc
DeBoer et al.(2011)
YGL166W_48.1
0.744
0.744
CUP2
M08550_2.00
Saccharomyces cerevisiae
TCTTTTTGCTG
CAGCAAAAAGA
Misc
DeBoer et al.(2011)
YGL166W_48.2
0.744
0.744
CUP2
M08551_2.00
Saccharomyces cerevisiae
TCTTTTTTGCTG
CAGCAAAAAAGA
Misc
DeBoer et al.(2011)
YGL166W_48.3
0.744
0.744
CUP2
M10408_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CUP2_Q4
0.744
0.744
CUP2
M08453_2.00
Saccharomyces cerevisiae
CWTTTYYGCTG
CAGCRRAAAWG
COMPILED
Mathelier et al.(2014)
MA0287.1
0.744
0.744
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Scas_Contig710.11
Copper fist
2
40
VLINGVKYACERCIRGHRVTTCNHTDQPLMMIKPKGRPS
Links
Other
Copper fist
family TFs
Other
Saccharomyces castellii
TFs
57 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARB_00440
Arthroderma benhamiae
ARB_00440
I
0.000
ANIA_01298
Aspergillus nidulans
CADANIAG00001319
D
0.000
PVAR5_5311
Byssochlamys spectabilis
PVAR5_5311
I
0.000
A1O3_05723
Capronia epimyces
A1O3_05723
I
0.000
PV04_06676
Capronia semiimmersa
PV04_06676
I
0.000
Z519_03796
Cladophialophora bantiana
Z519_03796
I
0.000
G647_06262
Cladophialophora carrionii
G647_06262
I
0.000
PV07_03563
Cladophialophora immunda
PV07_03563
I
0.000
A1O5_08857
Cladophialophora psammophila
A1O5_08857
I
0.000
A1O7_06270
Cladophialophora yegresii
A1O7_06270
I
0.000
CIMG_10254
Coccidioides immitis
CIMG_10254
I
0.000
CPC735_013440
Coccidioides posadasii
CPC735_013440
I
0.000
DOTSEDRAFT_69021
Dothistroma septosporum
DOTSEDRAFT_69021
I
0.000
A1O9_10773
Exophiala aquamarina
A1O9_10773
I
0.000
HMPREF1120_04164
Exophiala dermatitidis
HMPREF1120_04164
I
0.000
PV11_07531
Exophiala sideris
PV11_07531
I
0.000
PV08_08114
Exophiala spinifera
PV08_08114
I
0.000
PV05_08012
Exophiala xenobiotica
PV05_08012
I
0.000
Z517_01133
Fonsecaea pedrosoi
Z517_01133
I
0.000
MCYG_06262
Microsporum canis
MCYG_06262
I
0.000
MGYG_06696
Microsporum gypseum
MGYG_06696
I
0.000
fgenesh1_pm.C_scaffold_1000119
Mycosphaerella fijiensis
fgenesh1_pm.C_scaffold_1000119
I
0.000
fgenesh1_pm.C_chr_1000941
Mycosphaerella graminicola
fgenesh1_pm.C_chr_1000941
I
0.000
PABG_03267
Paracoccidioides brasiliensis
PABG_03267
I
0.000
PAAG_02798
Paracoccidioides sp lutzii
PAAG_02798
I
0.000
Pc16g06560
Penicillium chrysogenum
Pc16g06560
I
0.000
PDIP_40460
Penicillium digitatum
PDIP_40460
I
0.000
PEX1_052970
Penicillium expansum
PEX1_052970
I
0.000
PITC_023420
Penicillium italicum
PITC_023420
I
0.000
PCH_Pc16g06560
Penicillium rubens
PCH_Pc16g06560
I
0.000
U727_0043047031
Penicillium solitum
U727_0043047031
I
0.000
Z518_05851
Rhinocladiella mackenziei
Z518_05851
I
0.000
SEPMUDRAFT_146214
Sphaerulina musiva
SEPMUDRAFT_146214
I
0.000
H102_01702
Trichophyton rubrum
H102_01702
I
0.000
H105_01718
Trichophyton soudanense
H105_01718
I
0.000
TRV_02680
Trichophyton verrucosum
TRV_02680
I
0.000
GSTUM_00003292001
Tuber melanosporum
GSTUM_00003292001
I
0.000
UREG_03477
Uncinocarpus reesii
UREG_03477
I
0.000
PV09_02314
Verruconis gallopava
PV09_02314
N
0.000
Mycgr3G84231
Zymoseptoria tritici
Mycgr3G84231
I
0.000