CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSPFOG00000019352 *(Poecilia formosa)* CSD
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00313 (CSD)	IPR002059	ENSPFOG00000019352	T164748_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
LIN28B M04663_2.00	Homo sapiens	CGCGRWRDRRCDGCG	CGCHGYYHYWYCGCG	SELEX Yin et al.(2017) LIN28B_FL_HT-SELEX	0.848	0.848
LIN28B M04664_2.00	Homo sapiens	CGCGRTRNNRCDGCG	CGCHGYNNYAYCGCG	SELEX Yin et al.(2017) LIN28B_FL_Methyl-HT-SELEX	0.848	0.848
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSPFOP00000019469	CSD	35	107	GSGFCKWFNVRMGFGFISMTNSEGSPVDPPLDVFVHQSKLVMEGFRSLKEGEQVEFIYKKSSKGLESLRVTGP

Links
Other CSD family TFs
Other *Poecilia formosa* TFs