LIN28B (Taeniopygia guttata)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSTGUG00000012225 T164812_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LIN28B
M04663_2.00 		Homo sapiens
CGCGRWRDRRCDGCG
CGCHGYYHYWYCGCG		 SELEX
Yin et al.(2017)
LIN28B_FL_HT-SELEX 		0.970 0.970
LIN28B
M04664_2.00 		Homo sapiens
CGCGRTRNNRCDGCG
CGCHGYNNYAYCGCG		 SELEX
Yin et al.(2017)
LIN28B_FL_Methyl-HT-SELEX 		0.970 0.970
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000012590 CSD 30 102

Links

Other CSD family TFs
Other Taeniopygia guttata TFs

134 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10007406 Chelonia mydas Cmyd_10007406 N 0.000
arid4a Gasterosteus aculeatus ENSGACG00000004018 N 0.000
ENSOANG00000021731 Ornithorhynchus anatinus ENSOANG00000021731 N 0.000
ENSPFOG00000018637 Poecilia formosa ENSPFOG00000018637 N 0.000
Sakowv30029818m.g Saccoglossus kowalevskii Sakowv30029818m.g N 0.000
ENSXMAG00000004904 Xiphophorus maculatus ENSXMAG00000004904 N 0.000