YBX2 (Tursiops truncatus)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSTTRG00000009780 T164833_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YBX1
M04661_2.00 		Homo sapiens
GRTGGWACR
YGTWCCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX 		0.982 0.982
YBX1
M10411_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q3 		0.982 0.982
YBX1
M10412_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q4 		0.982 0.982
YBX1
M04662_2.00 		Homo sapiens
GRTGKDRCD
HGYHMCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX 		0.982 0.982
NEMVEDRAFT_v1g104083
M01207_2.00 		Nematostella vectensis
NNNDDHRN
NYDHHNNN		 PBM
Lambert et al.(2019)
pTH9768 		0.804 0.804
cey-1
M01903_2.00 		Caenorhabditis elegans
NNNGRTRDD
HHYAYCNNN		 PBM
Weirauch et al.(2014)
pTH8991 		0.768 0.768
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000009273 CSD 96 158

Links

Other CSD family TFs
Other Tursiops truncatus TFs

298 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI003297 Acyrthosiphon pisum ACYPI003297 I 0.000
AAEL008417 Aedes aegypti AAEL008417 N 0.000
ALNC14_126360 Albugo laibachii ALNC14_126360 N 0.000
ANCCAN_29654 Ancylostoma caninum ANCCAN_29654 N 0.000
ANCCEY_08672 Ancylostoma ceylanicum ANCCEY_08672 N 0.000
ACAC_0000409101 Angiostrongylus cantonensis ACAC_0000409101 N 0.000
ACOC_0001323101 Angiostrongylus costaricensis ACOC_0001323101 N 0.000
AALB007196 Anopheles albimanus AALB007196 N 0.000
AARA009694 Anopheles arabiensis AARA009694 N 0.000
AATE006267 Anopheles atroparvus AATE006267 N 0.000
ACHR002403 Anopheles christyi ACHR002403 N 0.000
ACOM033320 Anopheles coluzzii ACOM033320 N 0.000
ACUA003510 Anopheles culicifacies ACUA003510 N 0.000
ADAC009894 Anopheles darlingi ADAC009894 N 0.000
ADIR002941 Anopheles dirus ADIR002941 N 0.000
AEPI008570 Anopheles epiroticus AEPI008570 N 0.000
AFAF018499 Anopheles farauti AFAF018499 N 0.000
AFUN011346 Anopheles funestus AFUN011346 N 0.000
AGAP004110 Anopheles gambiae AGAP004110 N 0.000
AMAM021723 Anopheles maculatus AMAM021723 N 0.000
AMEC005071 Anopheles melas AMEC005071 N 0.000
AMEM002948 Anopheles merus AMEM002948 N 0.000
AMIN003838 Anopheles minimus AMIN003838 N 0.000
AQUA009805 Anopheles quadriannulatus AQUA009805 N 0.000
ASIS023527 Anopheles sinensis ASIS023527 N 0.000
ASTEI04275 Anopheles stephensi ASTEI04275 N 0.000
GB50764 Apis mellifera GB50764 I 0.000
ALUE_0001851001 Ascaris lumbricoides ALUE_0001851001 N 0.000
ASU_10445 Ascaris suum ASU_10445 N 0.000
BATDEDRAFT_89306 Batrachochytrium dendrobatidis BATDEDRAFT_89306 N 0.000
BGIBMGA013514 Bombyx mori BGIBMGA013514 N 0.000
estExt_fgenesh2_pg.C_1070085 Branchiostoma floridae estExt_fgenesh2_pg.C_1070085 N 0.000
estExt_fgenesh2_pm.C_3240002 Branchiostoma floridae estExt_fgenesh2_pm.C_3240002 N 0.000
CBN09380 Caenorhabditis brenneri CBN09380 N 0.000
Y73E7A.1 Caenorhabditis elegans WBGene00022268 N 0.000
CJA05209 Caenorhabditis japonica CJA05209 N 0.000
CRE03905 Caenorhabditis remanei CRE03905 N 0.000
Cflo_06133--XP_394373.1_APIME Camponotus floridanus Cflo_06133--XP_394373.1_APIME I 0.000
CapteG224864 Capitella teleta CapteG224864 I 0.000
CLEC000086 Cimex lectularius CLEC000086 N 0.000
CLEC002888 Cimex lectularius CLEC002888 N 0.000
ENSCING00000023833 Ciona intestinalis ENSCING00000023833 N 0.000
CGI_10019404 Crassostrea gigas CGI_10019404 N 0.000
CpipJ_CPIJ005084 Culex pipiens CpipJ_CPIJ005084 N 0.000
CPIJ005084 Culex quinquefasciatus CPIJ005084 N 0.000
KGM_20190 Danaus plexippus KGM_20190 I 0.000
DAPPUDRAFT_303074 Daphnia pulex DAPPUDRAFT_303074 N 0.000
DICVIV_03175 Dictyocaulus viviparus DICVIV_03175 N 0.000
DILT_0001250601 Diphyllobothrium latum DILT_0001250601 N 0.000
GH18160 Drosophila grimshawi FBgn0125628 I 0.000
GK13574 Drosophila willistoni FBgn0215582 I 0.000
GE25578 Drosophila yakuba FBgn0242642 I 0.000
GPUH_0000676401 Gongylonema pulchrum GPUH_0000676401 N 0.000
GUITHDRAFT_162866 Guillardia theta GUITHDRAFT_162866 N 0.000
HCOI00594600 Haemonchus contortus HCOI00594600 N 0.000
HPLM_0000348901 Haemonchus placei HPLM_0000348901 N 0.000
HHAL005242-PA Halyomorpha halys HHAL005242-PA I 0.000
Hsal_04778--XP_394373.1_APIME Harpegnathos saltator Hsal_04778--XP_394373.1_APIME I 0.000
HMEL009197 Heliconius melpomene HMEL009197 N 0.000
HPBE_0001252601 Heligmosomoides bakeri HPBE_0001252601 N 0.000
HelroG66455 Helobdella robusta HelroG66455 N 0.000
ISCW011313 Ixodes scapularis ISCW011313 N 0.000
LotgiG126557 Lottia gigantea LotgiG126557 N 0.000
LCUP006380 Lucilia cuprina LCUP006380 N 0.000
MCINX012524 Melitaea cinxia MCINX012524 I 0.000
maker-nMf.1.1.scaf18285-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf18285-snap-gene-0.4 N 0.000
MhA1_Contig1250.frz3.gene10 Meloidogyne hapla MhA1_Contig1250.frz3.gene10 N 0.000
Minc12734 Meloidogyne incognita Minc12734 N 0.000
mgf019496m Mimulus guttatus mgf019496m I 0.000
ML11467a Mnemiopsis leidyi ML11467a N 0.000
MDOA001488 Musca domestica MDOA001488 I 0.000
NV13812 Nasonia vitripennis NV13812 I 0.000
NECAME_12352 Necator americanus NECAME_12352 N 0.000
NEMVEDRAFT_v1g201358 Nematostella vectensis NEMVEDRAFT_v1g201358 I 0.000
NBR_0000605501 Nippostrongylus brasiliensis NBR_0000605501 N 0.000
Ocbimv22013575m.g Octopus bimaculoides Ocbimv22013575m.g I 0.000
OESDEN_05486 Oesophagostomum dentatum OESDEN_05486 N 0.000
ccdc124 Oryzias latipes ENSORLG00000015728 N 0.000
PEQ_0000413701 Parascaris equorum PEQ_0000413701 N 0.000
PHUM036320 Pediculus humanus PHUM036320 N 0.000
estExt_fgenesh1_kg.C_80399 Phytophthora capsici estExt_fgenesh1_kg.C_80399 N 0.000
fgenesh1_pg.C_scaffold_73784000001 Phytophthora capsici fgenesh1_pg.C_scaffold_73784000001 N 0.000
fgenesh_scip_prom.46568.2049 Phytophthora kernoviae fgenesh_scip_prom.46568.2049 N 0.000
fgenesh_scip_prom.28083.7036 Phytophthora lateralis fgenesh_scip_prom.28083.7036 N 0.000
F443_19335 Phytophthora parasitica F443_19335 N 0.000
Phyra74523 Phytophthora ramorum Phyra74523 N 0.000
Physo132366 Phytophthora sojae Physo132366 N 0.000
maker-pir_contig_430-fgenesh-gene-0.3 Pythium irregulare maker-pir_contig_430-fgenesh-gene-0.3 N 0.000
maker-piw_contig_1911-snap-gene-0.6 Pythium iwayamai maker-piw_contig_1911-snap-gene-0.6 N 0.000
PYU1_G003004 Pythium ultimum PYU1_G003004 N 0.000
maker-pve_contig_105-snap-gene-0.29 Pythium vexans maker-pve_contig_105-snap-gene-0.29 N 0.000
RPRC009760 Rhodnius prolixus RPRC009760 N 0.000
SPRG_06372 Saprolegnia parasitica SPRG_06372 N 0.000
A_06553 Schistosoma haematobium A_06553 N 0.000
Sjc_0011880 Schistosoma japonicum Sjc_0011880 N 0.000
Smp_004360 Schistosoma mansoni Smp_004360 N 0.000
SMRZ_0002114501 Schistosoma margrebowiei SMRZ_0002114501 N 0.000
SBAD_0000307901 Soboliphyme baturini SBAD_0000307901 N 0.000
SINV12391 Solenopsis invicta SINV12391 I 0.000
SPU_001776 Strongylocentrotus purpuratus SPU_001776 N 0.000
TELCIR_11967 Teladorsagia circumcincta TELCIR_11967 N 0.000
tetur18g00680 Tetranychus urticae tetur18g00680 I 0.000
TCLT_0001081001 Thelazia callipaeda TCLT_0001081001 N 0.000
TC004658 Tribolium castaneum TC004658 N 0.000
D917_07703 Trichinella nativa D917_07703 N 0.000
EFV51436 Trichinella spiralis EFV51436 N 0.000
TRE_0001918901 Trichobilharzia regenti TRE_0001918901 N 0.000
D918_07944 Trichuris suis D918_07944 N 0.000