CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.25542s0051
(
Boechera stricta
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
Bostr.25542s0051
T165424_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CSP4
M01902_2.00
Arabidopsis thaliana
AAWAAAAM
KTTTTWTT
PBM
Weirauch et al.(2014)
pTH7494
0.894
0.894
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.25542s0051.1.p
CSD
11
77
RKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLAADESVEFEVEIDNNGRPKAIDVSGP
Links
Other
CSD
family TFs
Other
Boechera stricta
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M437DRAFT_67323
Aureobasidium melanogenum
M437DRAFT_67323
N
MVLG_05769
Microbotryum violaceum
MVLG_05769
N
MVLG_06491
Microbotryum violaceum
MVLG_06491
N
RHTO_00750
Rhodosporidium toruloides
RHTO_00750
N
RHTO_01872
Rhodosporidium toruloides
RHTO_01872
N
e_gw1.10.50.1
Sporobolomyces roseus
e_gw1.10.50.1
N