CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGMOG00000004951
(
Gadus morhua
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF09271 (LAG1-DNAbind)
IPR015351
ENSGMOG00000004951
T166067_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RBPJ
M00735_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig2
0.907
0.907
RBPJ
M00736_2.00
Homo sapiens
NNNYTCHCAN
NTGDGARNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig4
0.907
0.907
RBPJ
M00737_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1
0.907
0.907
RBPJ
M00738_2.00
Homo sapiens
NBTCHCAN
NTGDGAVN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1
0.907
0.907
RBPJ
M00739_2.00
Homo sapiens
NNBTCHCAN
NTGDGAVNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His
0.907
0.907
RBPJ
M00740_2.00
Homo sapiens
NNNYTCYCAN
NTGRGARNNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2
0.907
0.907
RBPJ
M00741_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2
0.907
0.907
RBPJ
M00742_2.00
Homo sapiens
NDYTCHCAB
VTGDGARHN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5
0.907
0.907
RBPJ
M08105_2.00
Homo sapiens
NNTTCCCABN
NVTGGGAANN
ChIP-seq
Mathelier et al.(2014)
MA1116.1
0.907
0.907
RBPJ
M09020_2.00
Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV
Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A
0.907
0.907
Rbpj
M09021_2.00
Mus musculus
NBTTCCCASVV
BBSTGGGAAVN
Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A
0.907
0.907
RBPJ
M10413_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_01
0.907
0.907
RBPJ
M10414_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_Q4
0.907
0.907
Su(H)
M10415_2.00
Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB
Transfac
Matys et al.(2006)
I$SUH_01
0.775
0.775
Su(H)
M08455_2.00
Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD
COMPILED
Mathelier et al.(2014)
MA0085.1
0.775
0.775
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGMOP00000005239
CSL
15
145
VLILHAKVAQKSYGNEKRFFCPPPCVYLMGSGWQKKLESMEREGCTEQEAQPCAFIGIGNSEQEMQQLNLEGKHFCTAKTLYISDSDKRKHFMLSVQMFYGNSADIGVFLSKRIKVISKPSKKKQSLKNAD
Links
Other
CSL
family TFs
Other
Gadus morhua
TFs
165 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000011610
Ailuropoda melanoleuca
ENSAMEG00000011610
N
0.000
ENSAPLG00000008758
Anas platyrhynchos
ENSAPLG00000008758
N
0.000
ARNTL2
Anolis carolinensis
ENSACAG00000012446
N
0.000
Afo_R006305
Aptenodytes forsteri
Afo_R006305
N
0.000
ENSAMXG00000020233
Astyanax mexicanus
ENSAMXG00000020233
I
0.000
ENSP00000266503-D1
Bos grunniens
ENSP00000266503-D1
N
0.000
ARNTL2
Bos taurus
ENSBTAG00000011804
N
0.000
Brh_R011091
Buceros rhinoceros
Brh_R011091
N
0.000
Aan_R007949
Calypte anna
Aan_R007949
N
0.000
ARNTL2
Canis familiaris
ENSCAFG00000011089
N
0.000
ENSCSAG00000007636
Chlorocebus sabaeus
ENSCSAG00000007636
N
0.000
arntl2
Danio rerio
ENSDARG00000041381
I
0.000
ARNTL2
Felis catus
ENSFCAG00000000386
N
0.000
ENSFALG00000003942
Ficedula albicollis
ENSFALG00000003942
N
0.000
ARNTL2
Gallus gallus
ENSGALG00000014096
N
0.000
Gfo_R015185
Geospiza fortis
Gfo_R015185
N
0.000
ARNTL2
Homo sapiens
ENSG00000029153
N
0.000
ENSSTOG00000001344
Ictidomys tridecemlineatus
ENSSTOG00000001344
N
0.000
ENSLACG00000009646
Latimeria chalumnae
ENSLACG00000009646
N
0.000
ENSLOCG00000015224
Lepisosteus oculatus
ENSLOCG00000015224
N
0.000
ENSP00000266503
Macaca fascicularis
ENSP00000266503
N
0.000
ARNTL2
Macaca mulatta
ENSMMUG00000023249
N
0.000
ENSMEUG00000007045
Macropus eugenii
ENSMEUG00000007045
N
0.000
ARNTL2
Meleagris gallopavo
ENSMGAG00000013735
N
0.000
ENSMPUG00000010512
Mustela putorius furo
ENSMPUG00000010512
N
0.000
Myotis_brandtii_ARNTL2_10027352
Myotis brandtii
Myotis_brandtii_ARNTL2_10027352
N
0.000
ARNTL2
Myotis lucifugus
ENSMLUG00000003256
N
0.000
ENSNLEG00000005463
Nomascus leucogenys
ENSNLEG00000005463
N
0.000
Ogr07520
Ophisaurus gracilis
Ogr07520
N
0.000
ENSONIG00000014665
Oreochromis niloticus
ENSONIG00000014665
I
0.000
arntl2
Oryzias latipes
ENSORLG00000010946
I
0.000
ARNTL2
Otolemur garnettii
ENSOGAG00000011668
N
0.000
ENSOARG00000019779
Ovis aries
ENSOARG00000019779
N
0.000
ARNTL2
Pan troglodytes
ENSPTRG00000004788
N
0.000
ENSPANG00000004474
Papio anubis
ENSPANG00000004474
N
0.000
ENSPSIG00000009416
Pelodiscus sinensis
ENSPSIG00000009416
N
0.000
ENSPFOG00000016287
Poecilia formosa
ENSPFOG00000016287
I
0.000
Pvit_19389
Pogona vitticeps
Pvit_19389
N
0.000
ENSPPYG00000004380
Pongo abelii
ENSPPYG00000004380
N
0.000
ARNTL2
Procavia capensis
ENSPCAG00000008486
N
0.000
ARNTL2
Pteropus vampyrus
ENSPVAG00000013771
N
0.000
ARNTL2
Sus scrofa
ENSSSCG00000000551
N
0.000
ENSTGUG00000012163
Taeniopygia guttata
ENSTGUG00000012163
N
0.000
arntl2
Takifugu rubripes
ENSTRUG00000007832
I
0.000
ENSTSYG00000005541
Tarsius syrichta
ENSTSYG00000005541
N
0.000
arntl2
Tetraodon nigroviridis
ENSTNIG00000012142
I
0.000
ARNTL2
Tursiops truncatus
ENSTTRG00000012339
N
0.000
Tal_R011603
Tyto alba
Tal_R011603
N
0.000
ENSXMAG00000001482
Xiphophorus maculatus
ENSXMAG00000001482
I
0.000