CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RPRC014254
(
Rhodnius prolixus
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF09271 (LAG1-DNAbind)
IPR015351
RPRC014254
T166253_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Su(H)
M10415_2.00
Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB
Transfac
Matys et al.(2006)
I$SUH_01
0.786
0.786
Su(H)
M08455_2.00
Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD
COMPILED
Mathelier et al.(2014)
MA0085.1
0.786
0.786
RBPJ
M00735_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig2
0.709
0.709
RBPJ
M00736_2.00
Homo sapiens
NNNYTCHCAN
NTGDGARNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig4
0.709
0.709
RBPJ
M00737_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1
0.709
0.709
RBPJ
M00738_2.00
Homo sapiens
NBTCHCAN
NTGDGAVN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1
0.709
0.709
RBPJ
M00739_2.00
Homo sapiens
NNBTCHCAN
NTGDGAVNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His
0.709
0.709
RBPJ
M00740_2.00
Homo sapiens
NNNYTCYCAN
NTGRGARNNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2
0.709
0.709
RBPJ
M00741_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2
0.709
0.709
RBPJ
M00742_2.00
Homo sapiens
NDYTCHCAB
VTGDGARHN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5
0.709
0.709
RBPJ
M08105_2.00
Homo sapiens
NNTTCCCABN
NVTGGGAANN
ChIP-seq
Mathelier et al.(2014)
MA1116.1
0.709
0.709
RBPJ
M09020_2.00
Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV
Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A
0.709
0.709
Rbpj
M09021_2.00
Mus musculus
NBTTCCCASVV
BBSTGGGAAVN
Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A
0.709
0.709
RBPJ
M10413_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_01
0.709
0.709
RBPJ
M10414_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_Q4
0.709
0.709
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RPRC014254-PA
CSL
26
144
IVILHAKVAQKSYGNEKRFFCPPPCIYLYGEGWRLRQEQLLREGDSEHAAQLCAFIGIGNSDQDMQQLDLNNGKQYCAAKTLYISDSDKRKHFMLSVKMFYGSGHDIGVFQTSGTKVAL
Links
Other
CSL
family TFs
Other
Rhodnius prolixus
TFs
61 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CADAFLAG00012297
Aspergillus flavus
CADAFLAG00012297
I
0.000
ANIA_06846
Aspergillus nidulans
CADANIAG00007644
D
0.000
CADAORAG00004258
Aspergillus oryzae
CADAORAG00004258
I
0.000
M438DRAFT_344531
Aureobasidium pullulans
M438DRAFT_344531
I
0.000
AUEXF2481DRAFT_456199
Aureobasidium subglaciale
AUEXF2481DRAFT_456199
I
0.000
PVAR5_5942
Byssochlamys spectabilis
PVAR5_5942
I
0.000
Z519_01437
Cladophialophora bantiana
Z519_01437
I
0.000
CFIO01_03805
Colletotrichum fioriniae
CFIO01_03805
I
0.000
CGGC5_3013
Colletotrichum gloeosporioides
CGGC5_3013
I
0.000
GLRG_09907
Colletotrichum graminicola
GLRG_09907
I
0.000
Cob_02984
Colletotrichum orbiculare
Cob_02984
I
0.000
CSUB01_02738
Colletotrichum sublineola
CSUB01_02738
I
0.000
DOTSEDRAFT_71818
Dothistroma septosporum
DOTSEDRAFT_71818
N
0.000
A1O9_01837
Exophiala aquamarina
A1O9_01837
I
0.000
PV05_03582
Exophiala xenobiotica
PV05_03582
I
0.000
FFUJ_09498
Fusarium fujikuroi
FFUJ_09498
N
0.000
FGRRES_16159
Fusarium graminearum
FGRRES_16159
N
0.000
FOXG_11581
Fusarium oxysporum
FOXG_11581
N
0.000
FPSE_05211
Fusarium pseudograminearum
FPSE_05211
N
0.000
FVEG_10243
Fusarium verticillioides
FVEG_10243
N
0.000
MGG_06778
Magnaporthe oryzae
MGG_06778
N
0.000
MBM_00253
Marssonina brunnea
MBM_00253
I
0.000
MAC_02441
Metarhizium acridum
MAC_02441
I
0.000
MANI_013399
Metarhizium anisopliae
MANI_013399
N
0.000
MBR_05903
Metarhizium brunneum
MBR_05903
N
0.000
MGU_06573
Metarhizium guizhouense
MGU_06573
N
0.000
X797_005648
Metarhizium robertsii
X797_005648
N
0.000
gw1.11.59.1
Mycosphaerella fijiensis
gw1.11.59.1
N
0.000
estExt_Genewise1Plus.C_chr_50835
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_50835
N
0.000
F503_01249
Ophiostoma piceae uamh
F503_01249
I
0.000
PABG_05542
Paracoccidioides brasiliensis
PABG_05542
N
0.000
fgenesh1_pg.C_chr_6.1000096
Pichia stipitis
fgenesh1_pg.C_chr_6.1000096
I
0.000
MYCFIDRAFT_142135
Pseudocercospora fijiensis
MYCFIDRAFT_142135
N
0.000
PICST_32615
Scheffersomyces stipitis
PICST_32615
I
0.000
SEPMUDRAFT_157964
Sphaerulina musiva
SEPMUDRAFT_157964
N
0.000
VHEMI02369
Torrubiella hemipterigena
VHEMI02369
N
0.000
VDBG_01161
Verticillium albo atrum
VDBG_01161
I
0.000
VDBG_01161
Verticillium alfalfae
VDBG_01161
I
0.000
VDAG_00765
Verticillium dahliae
VDAG_00765
I
0.000
Mycgr3G72224
Zymoseptoria tritici
Mycgr3G72224
N
0.000