Sakowv30027441m.g (Saccoglossus kowalevskii)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF09271 (LAG1-DNAbind) IPR015351 Sakowv30027441m.g T166335_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		0.847 0.847
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		0.847 0.847
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		0.847 0.847
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		0.847 0.847
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		0.847 0.847
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		0.847 0.847
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		0.847 0.847
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		0.847 0.847
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		0.847 0.847
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		0.847 0.847
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		0.847 0.847
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		0.847 0.847
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		0.847 0.847
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		0.817 0.817
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		0.817 0.817
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23952123_peptide CSL 199 329
23952124_peptide CSL 135 265
23952125_peptide CSL 109 239
23952126_peptide CSL 69 199

Links

Other CSL family TFs
Other Saccoglossus kowalevskii TFs

166 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000009571 Ailuropoda melanoleuca ENSAMEG00000009571 N
Alligator_sinensis_CCG018823.1 Alligator sinensis Alligator_sinensis_CCG018823.1 N
ENSAPLG00000006697 Anas platyrhynchos ENSAPLG00000006697 N
ZHX3 Anolis carolinensis ENSACAG00000011460 N
Afo_R009777 Aptenodytes forsteri Afo_R009777 N
ENSP00000380144-D1 Bos grunniens ENSP00000380144-D1 N
ZHX3 Bos taurus ENSBTAG00000017594 N
ZHX3 Callithrix jacchus ENSCJAG00000018012 N
Aan_R003309 Calypte anna Aan_R003309 N
ZHX3 Canis familiaris ENSCAFG00000009101 N
ZHX3 Cavia porcellus ENSCPOG00000002738 N
Cmyd_10015207 Chelonia mydas Cmyd_10015207 N
ENSCSAG00000013961 Chlorocebus sabaeus ENSCSAG00000013961 N
ZHX3 Choloepus hoffmanni ENSCHOG00000009000 N
ZHX3 Dasypus novemcinctus ENSDNOG00000005387 N
Zhx3 Dipodomys ordii ENSDORG00000012139 N
ZHX3 Echinops telfairi ENSETEG00000005517 N
ZHX3 Felis catus ENSFCAG00000009034 N
ENSFALG00000005566 Ficedula albicollis ENSFALG00000005566 N
ENSGALG00000027603 Gallus gallus ENSGALG00000027603 N
ZHX3 Gorilla gorilla ENSGGOG00000008691 N
ZHX3 Homo sapiens ENSG00000174306 N
ENSSTOG00000011674 Ictidomys tridecemlineatus ENSSTOG00000011674 N
ENSLACG00000019016 Latimeria chalumnae ENSLACG00000019016 N
ENSLOCG00000004596 Lepisosteus oculatus ENSLOCG00000004596 N
ZHX3 Loxodonta africana ENSLAFG00000022196 N
ENSMMUP00000037938 Macaca fascicularis ENSMMUP00000037938 N
ZHX3 Macaca mulatta ENSMMUG00000005904 N
ZHX3 Monodelphis domestica ENSMODG00000000636 N
Zhx3 Mus musculus ENSMUSG00000035877 N
Myotis_brandtii_ZHX3_10025211 Myotis brandtii Myotis_brandtii_ZHX3_10025211 N
ZHX3 Myotis lucifugus ENSMLUG00000010226 N
ENSNLEG00000006488 Nomascus leucogenys ENSNLEG00000006488 N
ZHX3 Ochotona princeps ENSOPRG00000014931 N
Ogr10588 Ophisaurus gracilis Ogr10588 N
ZHX3 Ornithorhynchus anatinus ENSOANG00000014351 N
ZHX3 Oryctolagus cuniculus ENSOCUG00000006439 N
ZHX3 Otolemur garnettii ENSOGAG00000013363 N
ZHX3 Pan troglodytes ENSPTRG00000013501 N
ENSPANG00000023855 Papio anubis ENSPANG00000023855 N
ENSPSIG00000010741 Pelodiscus sinensis ENSPSIG00000010741 N
Pvit_08734 Pogona vitticeps Pvit_08734 N
ENSPPYG00000011012 Pongo abelii ENSPPYG00000011012 N
Zhx3 Rattus norvegicus ENSRNOG00000027988 N
ZHX3 Sorex araneus ENSSARG00000005424 N
ZHX3 Taeniopygia guttata ENSTGUG00000004817 N
ZHX3 Tursiops truncatus ENSTTRG00000002687 N