LDEC018359 (Leptinotarsa decemlineata)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF09271 (LAG1-DNAbind) IPR015351 LDEC018359 T166342_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		0.877 0.877
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		0.877 0.877
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		0.808 0.808
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		0.808 0.808
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		0.808 0.808
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		0.808 0.808
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		0.808 0.808
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		0.808 0.808
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		0.808 0.808
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		0.808 0.808
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		0.808 0.808
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		0.808 0.808
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		0.808 0.808
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		0.808 0.808
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		0.808 0.808
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LDEC018359-PA CSL 63 194

Links

Other CSL family TFs
Other Leptinotarsa decemlineata TFs

174 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_14757 Aegilops tauschii F775_14757 N
BRADI3G22040 Brachypodium distachyon BRADI3G22040 N
BRADI4G27720 Brachypodium distachyon BRADI4G27720 N
MLOC_71104 Hordeum vulgare MLOC_71104 N
LPERR08G10100 Leersia perrieri LPERR08G10100 N
LPERR09G03320 Leersia perrieri LPERR09G03320 N
OBART08G12060 Oryza barthii OBART08G12060 N
OBART09G04710 Oryza barthii OBART09G04710 N
OB08G20490 Oryza brachyantha OB08G20490 N
OB09G13080 Oryza brachyantha OB09G13080 N
ORGLA08G0106400 Oryza glaberrima ORGLA08G0106400 N
OGLUM08G12880 Oryza glumaepatula OGLUM08G12880 N
OGLUM09G05500 Oryza glumaepatula OGLUM09G05500 N
BGIOSGA028522 Oryza indica BGIOSGA028522 N
BGIOSGA040512 Oryza indica BGIOSGA040512 N
OLONG_022621 Oryza longistaminata OLONG_022621 N
OLONG_017657 Oryza longistaminata OLONG_017657 N
OMERI08G10040 Oryza meridionalis OMERI08G10040 N
OMERI09G03860 Oryza meridionalis OMERI09G03860 N
ONIVA08G08480 Oryza nivara ONIVA08G08480 N
ONIVA08G12360 Oryza nivara ONIVA08G12360 N
OPUNC08G10970 Oryza punctata OPUNC08G10970 N
OPUNC09G04190 Oryza punctata OPUNC09G04190 N
ORUFI08G13590 Oryza rufipogon ORUFI08G13590 N
ORUFI09G05300 Oryza rufipogon ORUFI09G05300 N
OS09G0306400 Oryza sativa OS09G0306400 N
Pavir.Bb01636 Panicum virgatum Pavir.Bb01636 N
Pavir.Ba02250 Panicum virgatum Pavir.Ba02250 N
Si031353m.g Setaria italica Si031353m.g N
Sb02g020760 Sorghum bicolor Sb02g020760 N
Traes_5AL_D9A4DFF71 Triticum aestivum Traes_5AL_D9A4DFF71 N
Traes_5DL_67A38E9B7 Triticum aestivum Traes_5DL_67A38E9B7 N
TRIUR3_05083 Triticum urartu TRIUR3_05083 N
GRMZM2G092137 Zea mays GRMZM2G092137 N
AC203957.3_FG004 Zea mays AC203957.3_FG004 N