CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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zf(cxxc)-1
(
Ciona intestinalis
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSCING00000002765
T167873_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BGIBMGA012843
M01907_2.00
Bombyx mori
NNCGCGTANVNN
NNBNTACGCGNN
PBM
Weirauch et al.(2014)
pTH9239
0.702
0.702
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCINP00000005646
CxxC
388
434
ASRVRRVRCKQCEACQRGDCRECVFCKDMRKYGGPGTMKQTCILRRC
Links
Other
CxxC
family TFs
Other
Ciona intestinalis
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000020635
Astyanax mexicanus
ENSAMXG00000020635
I
0.702
BGIBMGA012843
Bombyx mori
BGIBMGA012843
D
0.702
e_gw.283.81.1
Branchiostoma floridae
e_gw.283.81.1
I
0.702
gw.77.244.1
Branchiostoma floridae
gw.77.244.1
I
0.702
CapteG226024
Capitella teleta
CapteG226024
I
0.723
ENSCSAVG00000000252
Ciona savignyi
ENSCSAVG00000000252
N
0.979
LotgiG52553
Lottia gigantea
LotgiG52553
I
0.702
SMAR015271
Strigamia maritima
SMAR015271
I
0.702