CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KDM2A
(
Callithrix jacchus
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSCJAG00000001071
T167877_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.936
0.936
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.809
0.809
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.787
0.787
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.787
0.787
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.745
0.745
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.702
0.702
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000001896
CxxC
123
169
GARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRMKQSCVLRQC
ENSCJAP00000001914
CxxC
563
609
GARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRMKQSCVLRQC
ENSCJAP00000001924
CxxC
564
610
GARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRMKQSCVLRQC
Links
Other
CxxC
family TFs
Other
Callithrix jacchus
TFs
204 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_66005
Agaricus bisporus
AGABI2DRAFT_66005
N
M378DRAFT_81307
Amanita muscaria
M378DRAFT_81307
N
CERSUDRAFT_37906
Ceriporiopsis subvermispora
CERSUDRAFT_37906
N
DACRYDRAFT_76170
Dacryopinax sp
DACRYDRAFT_76170
N
FIBRA_03983
Fibroporia radiculosa
FIBRA_03983
N
FOMPIDRAFT_40824
Fomitopsis pinicola
FOMPIDRAFT_40824
N
GALMADRAFT_43465
Galerina marginata
GALMADRAFT_43465
N
GLOTRDRAFT_46612
Gloeophyllum trabeum
GLOTRDRAFT_46612
N
M413DRAFT_40509
Hebeloma cylindrosporum
M413DRAFT_40509
N
HETIRDRAFT_244542
Heterobasidion irregulare
HETIRDRAFT_244542
N
HYDPIDRAFT_93347
Hydnomerulius pinastri
HYDPIDRAFT_93347
N
JAAARDRAFT_699402
Jaapia argillacea
JAAARDRAFT_699402
N
K443DRAFT_686557
Laccaria amethystina
K443DRAFT_686557
N
LACBIDRAFT_150072
Laccaria bicolor
LACBIDRAFT_150072
N
Moror_3947
Moniliophthora roreri
Moror_3947
N
PAXINDRAFT_79360
Paxillus involutus
PAXINDRAFT_79360
N
PAXRUDRAFT_33323
Paxillus rubicundulus
PAXRUDRAFT_33323
N
PHACADRAFT_48027
Phanerochaete carnosa
PHACADRAFT_48027
N
e_gwh2.4.581.1
Phanerochaete chrysosporium
e_gwh2.4.581.1
N
PHLGIDRAFT_20014
Phlebiopsis gigantea
PHLGIDRAFT_20014
N
PILCRDRAFT_67276
Piloderma croceum
PILCRDRAFT_67276
N
PIIN_04884
Piriformospora indica
PIIN_04884
N
PISMIDRAFT_90191
Pisolithus microcarpus
PISMIDRAFT_90191
N
M404DRAFT_96018
Pisolithus tinctorius
M404DRAFT_96018
N
PLEOSDRAFT_1046937
Pleurotus ostreatus
PLEOSDRAFT_1046937
N
PLICRDRAFT_116803
Plicaturopsis crispa
PLICRDRAFT_116803
N
SCHCODRAFT_85141
Schizophyllum commune
SCHCODRAFT_85141
N
SCLCIDRAFT_130499
Scleroderma citrinum
SCLCIDRAFT_130499
N
M408DRAFT_78283
Serendipita vermifera
M408DRAFT_78283
N
CY34DRAFT_83686
Suillus luteus
CY34DRAFT_83686
N