CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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FBXL19
(
Loxodonta africana
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSLAFG00000030638
T168047_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.915
0.915
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.872
0.872
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.872
0.872
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.851
0.851
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.809
0.809
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.739
0.739
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000022556
CxxC
11
57
GARRRRTRCRRCRACVRTECGDCHFCRDMKKFGGPGRMKQSCLLRQC
ENSLAFP00000026505
CxxC
11
56
CGERRTRCRRCRACVRTECGDCHFCRDMKKFGGPGRMKQSCLLRQC
Links
Other
CxxC
family TFs
Other
Loxodonta africana
TFs
212 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000000861
Ailuropoda melanoleuca
ENSAMEG00000000861
N
0.000
Alligator_sinensis_CCG002326.1
Alligator sinensis
Alligator_sinensis_CCG002326.1
N
0.000
ENSAPLG00000009042
Anas platyrhynchos
ENSAPLG00000009042
N
0.000
DMTF1
Anolis carolinensis
ENSACAG00000001448
N
0.000
Afo_R015331
Aptenodytes forsteri
Afo_R015331
N
0.000
DMTF1
Bos taurus
ENSBTAG00000020878
N
0.000
Brh_R003353
Buceros rhinoceros
Brh_R003353
N
0.000
DMTF1
Callithrix jacchus
ENSCJAG00000014730
N
0.000
Aan_R000489
Calypte anna
Aan_R000489
N
0.000
DMTF1
Canis familiaris
ENSCAFG00000001819
N
0.000
DMTF1
Cavia porcellus
ENSCPOG00000002780
N
0.000
ENSCSAG00000012356
Chlorocebus sabaeus
ENSCSAG00000012356
N
0.000
CGI_10017105
Crassostrea gigas
CGI_10017105
N
0.000
dmtf1
Danio rerio
ENSDARG00000025824
N
0.000
ENSDORG00000010983
Dipodomys ordii
ENSDORG00000010983
N
0.000
DMTF1
Echinops telfairi
ENSETEG00000018444
N
0.000
DMTF1
Equus caballus
ENSECAG00000020746
N
0.000
DMTF1
Erinaceus europaeus
ENSEEUG00000012844
N
0.000
DMTF1
Felis catus
ENSFCAG00000013756
N
0.000
ENSFALG00000001933
Ficedula albicollis
ENSFALG00000001933
N
0.000
ENSGALG00000006628
Gallus gallus
ENSGALG00000006628
N
0.000
Gfo_R011500
Geospiza fortis
Gfo_R011500
N
0.000
DMTF1
Gorilla gorilla
ENSGGOG00000002781
N
0.000
DMTF1
Homo sapiens
ENSG00000135164
N
0.000
ENSSTOG00000010351
Ictidomys tridecemlineatus
ENSSTOG00000010351
N
0.000
ENSLACG00000013017
Latimeria chalumnae
ENSLACG00000013017
N
0.000
DMTF1
Loxodonta africana
ENSLAFG00000004637
N
0.000
ENSP00000332171
Macaca fascicularis
ENSP00000332171
N
0.000
DMTF1
Macaca mulatta
ENSMMUG00000010781
N
0.000
DMTF1
Meleagris gallopavo
ENSMGAG00000005151
N
0.000
DMTF1
Monodelphis domestica
ENSMODG00000016953
N
0.000
ENSMPUG00000018305
Mustela putorius furo
ENSMPUG00000018305
N
0.000
Dmtf1
Mus musculus
ENSMUSG00000042508
N
0.000
DMTF1
Myotis lucifugus
ENSMLUG00000017083
N
0.000
NEMVEDRAFT_v1g22981
Nematostella vectensis
NEMVEDRAFT_v1g22981
N
0.000
ENSNLEG00000014921
Nomascus leucogenys
ENSNLEG00000014921
N
0.000
Ogr14649
Ophisaurus gracilis
Ogr14649
N
0.000
ENSONIG00000009949
Oreochromis niloticus
ENSONIG00000009949
N
0.000
DMTF1
Ornithorhynchus anatinus
ENSOANG00000015391
N
0.000
DMTF1
Oryctolagus cuniculus
ENSOCUG00000009179
N
0.000
DMTF1
Otolemur garnettii
ENSOGAG00000000022
N
0.000
ENSOARG00000014574
Ovis aries
ENSOARG00000014574
N
0.000
DMTF1
Pan troglodytes
ENSPTRG00000019364
N
0.000
ENSPANG00000011083
Papio anubis
ENSPANG00000011083
N
0.000
ENSPSIG00000016443
Pelodiscus sinensis
ENSPSIG00000016443
N
0.000
ENSPMAG00000004094
Petromyzon marinus
ENSPMAG00000004094
N
0.000
Pvit_19395
Pogona vitticeps
Pvit_19395
N
0.000
ENSPPYG00000017849
Pongo abelii
ENSPPYG00000017849
N
0.000
DMTF1
Procavia capensis
ENSPCAG00000014639
N
0.000
DMTF1
Pteropus vampyrus
ENSPVAG00000007410
N
0.000
Dmtf1
Rattus norvegicus
ENSRNOG00000005908
N
0.000
Sakowv30027682m.g
Saccoglossus kowalevskii
Sakowv30027682m.g
N
0.000
ENSSHAG00000018587
Sarcophilus harrisii
ENSSHAG00000018587
N
0.000
DMTF1
Sorex araneus
ENSSARG00000002410
N
0.000
SMAR006666
Strigamia maritima
SMAR006666
N
0.000
DMTF1
Sus scrofa
ENSSSCG00000015393
N
0.000
DMTF1
Taeniopygia guttata
ENSTGUG00000002365
N
0.000
dmtf1
Tetraodon nigroviridis
ENSTNIG00000018722
N
0.000
DMTF1
Tursiops truncatus
ENSTTRG00000006785
N
0.000
Tal_R002829
Tyto alba
Tal_R002829
N
0.000
DMTF1
Vicugna pacos
ENSVPAG00000009890
N
0.000
XP_002935299
Xenopus tropicalis
XP_002935299
N
0.000