CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPPYG00000003001
(
Pongo abelii
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSPPYG00000003001
T168250_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.936
0.936
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.809
0.809
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.787
0.787
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.787
0.787
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.745
0.745
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.702
0.702
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPPYP00000003478
CxxC
124
170
GARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRMKQSCVLRQC
Links
Other
CxxC
family TFs
Other
Pongo abelii
TFs
203 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PAN0_017d5403
Pseudozyma antarctica
PAN0_017d5403
N
0.000
PAN0_017d5412
Pseudozyma antarctica
PAN0_017d5412
N
0.000
PaG_01125
Pseudozyma aphidis
PaG_01125
N
0.000
PaG_03026
Pseudozyma aphidis
PaG_03026
N
0.000
PFL1_06618
Pseudozyma flocculosa
PFL1_06618
N
0.000
PHSY_001173
Pseudozyma hubeiensis
PHSY_001173
N
0.000
PHSY_001184
Pseudozyma hubeiensis
PHSY_001184
N
0.000
sr16408
Sporisorium reilianum
sr16408
N
0.000
sr16416
Sporisorium reilianum
sr16416
N
0.000
UHOR_08270
Ustilago hordei
UHOR_08270
N
0.000
UM02022
Ustilago maydis
UM02022
N
0.000
UM05418
Ustilago maydis
UM05418
N
0.000