CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KDM2A
(
Tupaia belangeri
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSTBEG00000003398
T168338_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.936
0.936
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.809
0.809
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.787
0.787
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.787
0.787
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.745
0.745
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.702
0.702
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTBEP00000002970
CxxC
561
607
GARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRMKQSCVLRQC
Links
Other
CxxC
family TFs
Other
Tupaia belangeri
TFs
203 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACLA_074230
Aspergillus clavatus
CADACLAG00006381
N
AFUA_2G15260
Aspergillus fumigatus
CADAFUAG00004604
N
CADANGAG00007889
Aspergillus niger
CADANGAG00007889
N
EURHEDRAFT_417585
Aspergillus ruber
EURHEDRAFT_417585
N
M437DRAFT_60050
Aureobasidium melanogenum
M437DRAFT_60050
N
M438DRAFT_363806
Aureobasidium pullulans
M438DRAFT_363806
N
AUEXF2481DRAFT_234640
Aureobasidium subglaciale
AUEXF2481DRAFT_234640
N
AUEXF2481DRAFT_701448
Aureobasidium subglaciale
AUEXF2481DRAFT_701448
N
A1O3_08818
Capronia epimyces
A1O3_08818
N
Z519_02061
Cladophialophora bantiana
Z519_02061
N
G647_01486
Cladophialophora carrionii
G647_01486
N
PV07_06253
Cladophialophora immunda
PV07_06253
N
H072_136
Dactylellina haptotyla
H072_136
N
PV10_01954
Exophiala mesophila
PV10_01954
N
PV06_00861
Exophiala oligosperma
PV06_00861
N
PV06_05578
Exophiala oligosperma
PV06_05578
N
PV08_00876
Exophiala spinifera
PV08_00876
N
PV05_06583
Exophiala xenobiotica
PV05_06583
N
PV05_09876
Exophiala xenobiotica
PV05_09876
N
PMAA_001790
Penicillium marneffei
PMAA_001790
N
JL09_g1719
Pichia kudriavzevii
JL09_g1719
N
Z518_04980
Rhinocladiella mackenziei
Z518_04980
N
SAPIO_CDS10892
Scedosporium apiospermum
SAPIO_CDS10892
I
PMAA_001790
Talaromyces marneffei
PMAA_001790
N
TSTA_099190
Talaromyces stipitatus
TSTA_099190
N