CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMAR015271
(
Strigamia maritima
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
SMAR015271
T168518_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.894
0.894
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.872
0.872
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.809
0.809
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.787
0.787
BGIBMGA012843
M01907_2.00
Bombyx mori
NNCGCGTANVNN
NNBNTACGCGNN
PBM
Weirauch et al.(2014)
pTH9239
0.787
0.787
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.723
0.723
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.702
0.702
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMAR015271-PA
CxxC
635
681
SARRRRTRCKKCEACLRTDCGECHFCKDMRKFGGPGRMKQSCISRQC
Links
Other
CxxC
family TFs
Other
Strigamia maritima
TFs
257 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000016370
Astyanax mexicanus
ENSAMXG00000016370
I
irf4b
Gasterosteus aculeatus
ENSGACG00000004966
I
IRF8
Homo sapiens
ENSG00000140968
D
ENSMICG00000012090
Microcebus murinus
ENSMICG00000012090
I
ENSMPUG00000008641
Mustela putorius furo
ENSMPUG00000008641
I
Irf4
Mus musculus
ENSMUSG00000021356
D
Irf8
Mus musculus
ENSMUSG00000041515
D
Ogr05775
Ophisaurus gracilis
Ogr05775
I
IRF8
Ornithorhynchus anatinus
ENSOANG00000003741
I
irf4b
Oryzias latipes
ENSORLG00000012712
I
IRF8
Otolemur garnettii
ENSOGAG00000009262
I
ENSPFOG00000015506
Poecilia formosa
ENSPFOG00000015506
I
Irf4
Rattus norvegicus
ENSRNOG00000061070
I
ENSTGUG00000006609
Taeniopygia guttata
ENSTGUG00000006609
I
irf4b
Takifugu rubripes
ENSTRUG00000002946
I
irf4a
Tetraodon nigroviridis
ENSTNIG00000005370
I
IRF8
Vicugna pacos
ENSVPAG00000006643
I
irf8.L
Xenopus laevis
XB-GENE-985949
I
irf10
Xenopus tropicalis
XB-GENE-1033046
I
ENSXMAG00000017015
Xiphophorus maculatus
ENSXMAG00000017015
I