Alligator_sinensis_CCG006419.1 (Alligator sinensis)
CxxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02008 (zf-CXXC) IPR002857 Alligator_sinensis_CCG006419.1 T168565_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FBXL19
M01916_2.00 		Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN		 PBM
Weirauch et al.(2014)
pTH8570 		0.936 0.936
A6H8I1_DANRE
M01906_2.00 		Danio rerio
CGTACGYA
TRCGTACG		 PBM
Weirauch et al.(2014)
pTH9257 		0.894 0.894
KDM2B
M01911_2.00 		Homo sapiens
NNNNNNCGN
NCGNNNNNN		 PBM
Weirauch et al.(2014)
pTH9191 		0.894 0.894
kdm2ba
M01909_2.00 		Danio rerio
NNNNCGN
NCGNNNN		 PBM
Weirauch et al.(2014)
pTH8577 		0.872 0.872
KDM2A
M01915_2.00 		Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN		 PBM
Weirauch et al.(2014)
pTH9212 		0.787 0.787
kdm2aa
M01910_2.00 		Danio rerio
NCGNNNNNN
NNNNNNCGN		 PBM
Weirauch et al.(2014)
pTH8585 		0.723 0.723
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG006419.1 CxxC 10 56

Links

Other CxxC family TFs
Other Alligator sinensis TFs

238 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_206080 Agaricus bisporus AGABI2DRAFT_206080 N
M378DRAFT_8120 Amanita muscaria M378DRAFT_8120 N
CERSUDRAFT_93268 Ceriporiopsis subvermispora CERSUDRAFT_93268 N
CC1G_14832 Coprinopsis cinerea CC1G_14832 N
FIBRA_08530 Fibroporia radiculosa FIBRA_08530 N
FOMPIDRAFT_99099 Fomitopsis pinicola FOMPIDRAFT_99099 N
GALMADRAFT_240824 Galerina marginata GALMADRAFT_240824 N
GLOTRDRAFT_138211 Gloeophyllum trabeum GLOTRDRAFT_138211 N
GYMLUDRAFT_244445 Gymnopus luxurians GYMLUDRAFT_244445 N
M413DRAFT_442898 Hebeloma cylindrosporum M413DRAFT_442898 N
HETIRDRAFT_478421 Heterobasidion irregulare HETIRDRAFT_478421 N
K443DRAFT_672061 Laccaria amethystina K443DRAFT_672061 N
LACBIDRAFT_305525 Laccaria bicolor LACBIDRAFT_305525 N
MPER_01314 Moniliophthora perniciosa MPER_01314 N
Moror_14084 Moniliophthora roreri Moror_14084 N
PAXRUDRAFT_832240 Paxillus rubicundulus PAXRUDRAFT_832240 N
PHACADRAFT_32832 Phanerochaete carnosa PHACADRAFT_32832 N
fgenesh1_pg.C_scaffold_3000282 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_3000282 N
PHLGIDRAFT_66452 Phlebiopsis gigantea PHLGIDRAFT_66452 N
PILCRDRAFT_819897 Piloderma croceum PILCRDRAFT_819897 N
PLEOSDRAFT_1105666 Pleurotus ostreatus PLEOSDRAFT_1105666 N
SCHCODRAFT_245859 Schizophyllum commune SCHCODRAFT_245859 N
SCLCIDRAFT_1214941 Scleroderma citrinum SCLCIDRAFT_1214941 N
SERLA73DRAFT_162624 Serpula lacrymans SERLA73DRAFT_162624 N
CY34DRAFT_808438 Suillus luteus CY34DRAFT_808438 N