CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cflo_02982--XP_394324.2_APIME
(
Camponotus floridanus
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02008 (zf-CXXC)
IPR002857
Cflo_02982--XP_394324.2_APIME
T168576_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BGIBMGA012843
M01907_2.00
Bombyx mori
NNCGCGTANVNN
NNBNTACGCGNN
PBM
Weirauch et al.(2014)
pTH9239
0.848
0.848
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cflo_02982--XP_394324.2_APIME
CxxC
474
519
PRRRRTRCKKCEACTRQDCRECVYCQDMVKFGGSGRAKQTCLMRQC
Links
Other
CxxC
family TFs
Other
Camponotus floridanus
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
bHLH34
Arabidopsis lyrata
fgenesh2_kg.3__2536__AT3G23210.1
I
0.000
BHLH34
Arabidopsis thaliana
AT3G23210
D
0.000
Lus10020069.g
Linum usitatissimum
Lus10020069.g
N
0.000
POPTR_0004s03190
Populus trichocarpa
POPTR_0004s03190
N
0.000
POPTR_0011s03360
Populus trichocarpa
POPTR_0011s03360
N
0.000
29842.m003681
Ricinus communis
29842.m003681
N
0.000
SapurV1A.0502s0080
Salix purpurea
SapurV1A.0502s0080
N
0.000
SELMODRAFT_405883
Selaginella moellendorffii
SELMODRAFT_405883
I
0.000
PGSC0003DMG400019263
Solanum tuberosum
PGSC0003DMG400019263
I
0.000