Gfo_R013488 (Geospiza fortis)
CxxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02008 (zf-CXXC) IPR002857 Gfo_R013488 T168613_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KDM2A
M01915_2.00 		Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN		 PBM
Weirauch et al.(2014)
pTH9212 		0.979 0.979
FBXL19
M01916_2.00 		Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN		 PBM
Weirauch et al.(2014)
pTH8570 		0.809 0.809
kdm2ba
M01909_2.00 		Danio rerio
NNNNCGN
NCGNNNN		 PBM
Weirauch et al.(2014)
pTH8577 		0.787 0.787
KDM2B
M01911_2.00 		Homo sapiens
NNNNNNCGN
NCGNNNNNN		 PBM
Weirauch et al.(2014)
pTH9191 		0.787 0.787
A6H8I1_DANRE
M01906_2.00 		Danio rerio
CGTACGYA
TRCGTACG		 PBM
Weirauch et al.(2014)
pTH9257 		0.766 0.766
kdm2aa
M01910_2.00 		Danio rerio
NCGNNNNNN
NNNNNNCGN		 PBM
Weirauch et al.(2014)
pTH8585 		0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R013488 CxxC 571 617

Links

Other CxxC family TFs
Other Geospiza fortis TFs

208 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGOS_ADR304W Ashbya gossypii AGOS_ADR304W I 0.000
AWRI1499_4487 Brettanomyces bruxellensis AWRI1499_4487 I 0.000
CaO19.11911 Candida albicans CaO19.11911 I 0.000
CaO19.4433 Candida albicans CaO19.4433 I 0.000
CD36_06880 Candida dubliniensis CD36_06880 I 0.000
PGUG_03108 Candida guilliermondii PGUG_03108 I 0.000
CLUG_02576 Candida lusitaniae CLUG_02576 I 0.000
CORT_0A07880 Candida orthopsilosis CORT_0A07880 I 0.000
CPAG_01041 Candida parapsilosis CPAG_01041 I 0.000
CANTEDRAFT_127609 Candida tenuis CANTEDRAFT_127609 I 0.000
CTRG_04159 Candida tropicalis CTRG_04159 I 0.000
CLUG_02576 Clavispora lusitaniae CLUG_02576 I 0.000
DEHA2F25894g Debaryomyces hansenii DEHA2F25894g I 0.000
Ecym_8007 Eremothecium cymbalariae Ecym_8007 I 0.000
KAFR_0D04350 Kazachstania africana KAFR_0D04350 I 0.000
KLLA0_E17139g Kluyveromyces lactis KLLA0_E17139g I 0.000
Kwal_20171 Kluyveromyces waltii Kwal_20171 I 0.000
PAS_chr4_0937 Komagataella pastoris PAS_chr4_0937 I 0.000
KUCA_T00000816001 Kuraishia capsulata KUCA_T00000816001 I 0.000
SAKL0G08184g Lachancea kluyveri SAKL0G08184g I 0.000
LELG_00842 Lodderomyces elongisporus LELG_00842 I 0.000
PGUG_03108 Meyerozyma guilliermondii PGUG_03108 I 0.000
GNLVRS01_PISO0M06744g Millerozyma farinosa GNLVRS01_PISO0M06744g I 0.000
GNLVRS01_PISO0N06877g Millerozyma farinosa GNLVRS01_PISO0N06877g I 0.000
HPODL_03704 Ogataea parapolymorpha HPODL_03704 I 0.000
XP_002493672.1 Pichia pastoris XP_002493672.1 I 0.000
estExt_gwp_genewisePlus_worm.C_chr_6.10823 Pichia stipitis estExt_gwp_genewisePlus_worm.C_chr_6.10823 I 0.000
AACERI_AaceriADR304W Saccharomycetaceae sp ashbya aceri AACERI_AaceriADR304W I 0.000
PICST_84653 Scheffersomyces stipitis PICST_84653 I 0.000
SPAPADRAFT_130733 Spathaspora passalidarum SPAPADRAFT_130733 I 0.000
BN7_3628 Wickerhamomyces ciferrii BN7_3628 I 0.000