CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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dsx
(
Drosophila melanogaster
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00751 (DM)
IPR001275
FBgn0000504
T169272_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dsx
M06183_2.00
Drosophila melanogaster
TDRYVACWTWGYAG
CTRCWAWGTBRYHA
B1H
Zhu et al.(2011)
dsx-F_FlyReg_FBgn0000504
(Direct)
(Direct)
dsx
M06184_2.00
Drosophila melanogaster
TDRYVACWTWGYAG
CTRCWAWGTBRYHA
B1H
Zhu et al.(2011)
dsx-M_FlyReg_FBgn0000504
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dmrt99B
M01935_2.00
Drosophila melanogaster
WRTWDCNDNN
NNHNGHWAYW
PBM
Weirauch et al.(2014)
pTH9261
0.859
0.660
dmrt99B
M01211_2.00
Drosophila melanogaster
NNHDTDDNNN
NNNHHAHDNN
PBM
Lambert et al.(2019)
pTH9799
0.859
0.660
dmrt99B
M03720_2.00
Drosophila melanogaster
HNGHWACAATGTWDCND
HNGHWACATTGTWDCND
SELEX
Nitta et al.(2015)
dmrt99B_1
0.859
0.660
DMRTA2
M01930_2.00
Homo sapiens
NNHDTDDNNN
NNNHHAHDNN
PBM
Weirauch et al.(2014)
pTH9198
0.859
0.638
dmrta2
M01937_2.00
Xenopus tropicalis
NNWDWDDN
NHHWHWNN
PBM
Weirauch et al.(2014)
pTH9300
0.859
0.638
DMRTA2
M04692_2.00
Homo sapiens
VHTGTWDCVDHN
NDHBGHWACADB
SELEX
Yin et al.(2017)
DMRTA2_eDBD_HT-SELEX
0.859
0.638
DMRTA2
M10433_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DMRT5_01
0.859
0.638
DMRTA2
M04693_2.00
Homo sapiens
HHTGTWDCVNHN
NDNBGHWACADD
SELEX
Yin et al.(2017)
DMRTA2_eDBD_Methyl-HT-SELEX
0.859
0.638
dmd-5
M00659_2.00
Caenorhabditis elegans
WNWRTWDHNN
NNDHWAYWNW
PBM
Narasimhan et al.(2015)
pTH10777
0.856
0.638
dmd-4
M00656_2.00
Caenorhabditis elegans
NWGTAWCNNN
NNNGWTACWN
PBM
Narasimhan et al.(2015)
pTH10640
0.852
0.681
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0081256
DM
40
86
TPPNCARCRNHGLKITLKGHKRYCKFRYCTCEKCRLTADRQRVMALQ
FBpp0081257
DM
40
86
TPPNCARCRNHGLKITLKGHKRYCKFRYCTCEKCRLTADRQRVMALQ
FBpp0081258
DM
40
86
TPPNCARCRNHGLKITLKGHKRYCKFRYCTCEKCRLTADRQRVMALQ
FBpp0303106
DM
40
86
TPPNCARCRNHGLKITLKGHKRYCKFRYCTCEKCRLTADRQRVMALQ
FBpp0303107
DM
40
86
TPPNCARCRNHGLKITLKGHKRYCKFRYCTCEKCRLTADRQRVMALQ
FBpp0308767
DM
40
86
TPPNCARCRNHGLKITLKGHKRYCKFRYCTCEKCRLTADRQRVMALQ
Links
Other
DM
family TFs
Other
Drosophila melanogaster
TFs
198 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSGMOG00000009610
Gadus morhua
ENSGMOG00000009610
I
0.000
L893_g21958
Steinernema glaseri
L893_g21958
N
0.000