csin107166 (Clonorchis sinensis)
DM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00751 (DM) IPR001275 csin107166 T169742_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DMRT2
M01931_2.00 		Homo sapiens
NAATKTATHN
NDATAMATTN		 PBM
Weirauch et al.(2014)
pTH9189 		0.910 0.787
DMRT2
M10434_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT2_01 		0.910 0.787
DMRTA2
M01930_2.00 		Homo sapiens
NNHDTDDNNN
NNNHHAHDNN		 PBM
Weirauch et al.(2014)
pTH9198 		0.899 0.745
dmrta2
M01937_2.00 		Xenopus tropicalis
NNWDWDDN
NHHWHWNN		 PBM
Weirauch et al.(2014)
pTH9300 		0.899 0.745
DMRTA2
M04692_2.00 		Homo sapiens
VHTGTWDCVDHN
NDHBGHWACADB		 SELEX
Yin et al.(2017)
DMRTA2_eDBD_HT-SELEX 		0.899 0.745
DMRTA2
M10433_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT5_01 		0.899 0.745
DMRTA2
M04693_2.00 		Homo sapiens
HHTGTWDCVNHN
NDNBGHWACADD		 SELEX
Yin et al.(2017)
DMRTA2_eDBD_Methyl-HT-SELEX 		0.899 0.745
dmrt99B
M01935_2.00 		Drosophila melanogaster
WRTWDCNDNN
NNHNGHWAYW		 PBM
Weirauch et al.(2014)
pTH9261 		0.899 0.723
dmrt99B
M01211_2.00 		Drosophila melanogaster
NNHDTDDNNN
NNNHHAHDNN		 PBM
Lambert et al.(2019)
pTH9799 		0.899 0.723
dmrt99B
M03720_2.00 		Drosophila melanogaster
HNGHWACAATGTWDCND
HNGHWACATTGTWDCND		 SELEX
Nitta et al.(2015)
dmrt99B_1 		0.899 0.723
DMRT3
M01927_2.00 		Homo sapiens
NWTGTAWCMNN
NNKGWTACAWN		 PBM
Weirauch et al.(2014)
pTH9188 		0.878 0.702
DMRT3
M04681_2.00 		Homo sapiens
AWTGTAWCAAWWH
DWWTTGWTACAWT		 SELEX
Yin et al.(2017)
DMRT3_eDBD_HT-SELEX 		0.878 0.702
DMRT3
M10430_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT3_01 		0.878 0.702
DMRT3
M04682_2.00 		Homo sapiens
AATGTAWCRAWWY
RWWTYGWTACATT		 SELEX
Yin et al.(2017)
DMRT3_eDBD_Methyl-HT-SELEX 		0.878 0.702
dmd-5
M00659_2.00 		Caenorhabditis elegans
WNWRTWDHNN
NNDHWAYWNW		 PBM
Narasimhan et al.(2015)
pTH10777 		0.874 0.681
dmd-4
M00656_2.00 		Caenorhabditis elegans
NWGTAWCNNN
NNNGWTACWN		 PBM
Narasimhan et al.(2015)
pTH10640 		0.866 0.681
dmrt93B
M03718_2.00 		Drosophila melanogaster
NDTGTATCRWW
WWYGATACAHN		 SELEX
Nitta et al.(2015)
dmrt93B_1 		0.859 0.681
dmrt93B
M03719_2.00 		Drosophila melanogaster
NNHGTAWCNNN
NNNGWTACDNN		 SELEX
Nitta et al.(2015)
dmrt93B_2 		0.859 0.681
Dmrtb1
M09028_2.00 		Mus musculus
DGHWACAMWGTWDCHV
BDGHWACWKTGTWDCH		 Misc
Kulakovskiy et al.(2013)
DMRTB_MOUSE.H11MO.0.C 		0.855 0.574
Dmrt1
M09027_2.00 		Mus musculus
HDGHWACAAWGTWDCHN
NDGHWACWTTGTWDCHD		 Misc
Kulakovskiy et al.(2013)
DMRT1_MOUSE.H11MO.0.C 		0.853 0.660
DMRT1
M01928_2.00 		Homo sapiens
NDWGTWDCNN
NNGHWACWHN		 PBM
Weirauch et al.(2014)
pTH9197 		0.850 0.660
DMRT1
M01929_2.00 		Homo sapiens
TGTATCAA
TTGATACA		 PBM
Weirauch et al.(2014)
pTH9446 		0.850 0.660
DMRT1
M04683_2.00 		Homo sapiens
NWTGTWDCVWHN
NDWBGHWACAWN		 SELEX
Yin et al.(2017)
DMRT1_FL_HT-SELEX 		0.850 0.660
DMRT1
M10431_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT1_01 		0.850 0.660
DMRT1
M04684_2.00 		Homo sapiens
NDYGTWDCVNNN
NNNBGHWACRHN		 SELEX
Yin et al.(2017)
DMRT1_FL_Methyl-HT-SELEX 		0.850 0.660
For this family, TFs with SR scores > 0.845 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
csin107166 DM 27 73

Links

Other DM family TFs
Other Clonorchis sinensis TFs

529 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_19744 Aegilops tauschii F775_19744 N
F775_18830 Aegilops tauschii F775_18830 N
F775_10624 Aegilops tauschii F775_10624 N
GL3 Arabidopsis lyrata fgenesh2_kg.7__3280__AT5G41315.1 I
EGL3 Arabidopsis lyrata fgenesh2_kg.2__120__AT1G63650.2 N
GL3 Arabidopsis thaliana AT5G41315 I
BHLH2 Arabidopsis thaliana AT1G63650 N
Bostr.29223s0199 Boechera stricta Bostr.29223s0199 N
Bostr.7200s0145 Boechera stricta Bostr.7200s0145 I
Bo4g141990 Brassica oleracea Bo4g141990 I
Bra025508 Brassica rapa Bra025508 I
PK03576.1 Cannabis sativa PK03576.1 D
Cagra.2104s0007 Capsella grandiflora Cagra.2104s0007 N
Carubv10004345m.g Capsella rubella Carubv10004345m.g I
Carubv10019965m.g Capsella rubella Carubv10019965m.g N
Ca_05750 Cicer arietinum Ca_05750 I
Thhalv10027709m.g Eutrema salsugineum Thhalv10027709m.g I
gene32494-v1.0-hybrid Fragaria vesca gene32494-v1.0-hybrid I
GLYMA08G01810 Glycine max GLYMA08G01810 I
MLOC_38470 Hordeum vulgare MLOC_38470 N
LPERR04G17380 Leersia perrieri LPERR04G17380 N
LPERR08G11070 Leersia perrieri LPERR08G11070 N
LjSGA_008146.1 Lotus japonicus LjSGA_008146.1 I
cassava36456.valid.m1 Manihot esculenta cassava36456.valid.m1 I
MTR_8g098275 Medicago truncatula MTR_8g098275 I
mgf005803m Mimulus guttatus mgf005803m I
OBART01G20350 Oryza barthii OBART01G20350 N
OBART04G21320 Oryza barthii OBART04G21320 N
OBART04G21370 Oryza barthii OBART04G21370 N
OB04G28380 Oryza brachyantha OB04G28380 N
OB04G28350 Oryza brachyantha OB04G28350 N
OB01G30110 Oryza brachyantha OB01G30110 N
OB04G28390 Oryza brachyantha OB04G28390 N
ORGLA04G0183800 Oryza glaberrima ORGLA04G0183800 N
ORGLA04G0183900 Oryza glaberrima ORGLA04G0183900 N
ORGLA11G0077500 Oryza glaberrima ORGLA11G0077500 N
OGLUM04G21350 Oryza glumaepatula OGLUM04G21350 N
OGLUM04G21260 Oryza glumaepatula OGLUM04G21260 N
OGLUM01G23970 Oryza glumaepatula OGLUM01G23970 N
BGIOSGA014565 Oryza indica BGIOSGA014565 N
BGIOSGA014566 Oryza indica BGIOSGA014566 N
BGIOSGA014567 Oryza indica BGIOSGA014567 N
BGIOSGA015472 Oryza indica BGIOSGA015472 N
BGIOSGA003821 Oryza indica BGIOSGA003821 N
BGIOSGA003819 Oryza indica BGIOSGA003819 N
OLONG_009946 Oryza longistaminata OLONG_009946 N
OLONG_016958 Oryza longistaminata OLONG_016958 N
OLONG_016960 Oryza longistaminata OLONG_016960 N
OMERI01G18770 Oryza meridionalis OMERI01G18770 N
OMERI04G17790 Oryza meridionalis OMERI04G17790 N
OMERI04G17820 Oryza meridionalis OMERI04G17820 N
ONIVA01G22980 Oryza nivara ONIVA01G22980 N
ONIVA04G19650 Oryza nivara ONIVA04G19650 N
ONIVA04G19860 Oryza nivara ONIVA04G19860 N
OPUNC04G19030 Oryza punctata OPUNC04G19030 N
OPUNC04G19040 Oryza punctata OPUNC04G19040 N
ORUFI01G23050 Oryza rufipogon ORUFI01G23050 N
ORUFI04G22890 Oryza rufipogon ORUFI04G22890 N
ORUFI11G09150 Oryza rufipogon ORUFI11G09150 N
ORUFI04G22910 Oryza rufipogon ORUFI04G22910 N
OS04G0557800 Oryza sativa OS04G0557800 N
OS04G0557200 Oryza sativa OS04G0557200 N
Pavir.Cb00833 Panicum virgatum Pavir.Cb00833 N
POPTR_0003s12810 Populus trichocarpa POPTR_0003s12810 I
Pm023805 Prunus mume Pm023805 I
PRUPE_ppa002762mg Prunus persica PRUPE_ppa002762mg I
SapurV1A.0612s0160 Salix purpurea SapurV1A.0612s0160 N
Sb06g016380 Sorghum bicolor Sb06g016380 N
TCM_016261 Theobroma cacao TCM_016261 I
Traes_2AL_4F71A8FB4 Triticum aestivum Traes_2AL_4F71A8FB4 N
TRIUR3_35186 Triticum urartu TRIUR3_35186 N
TRIUR3_26157 Triticum urartu TRIUR3_26157 N
TRIUR3_18279 Triticum urartu TRIUR3_18279 N
VIT_02s0025g03450 Vitis vinifera VIT_02s0025g03450 N