CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold54-EXSNAP2012.9
(
Pristionchus exspectatus
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00751 (DM)
IPR001275
scaffold54-EXSNAP2012.9
T170009_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dmd-9
M00661_2.00
Caenorhabditis elegans
ACCTTT
AAAGGT
PBM
Narasimhan et al.(2015)
pTH8999
0.870
0.689
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold54-EXSNAP2012.9
DM
58
102
RTLFCRKCEGHGQQVILKGHASKCPYNNCTCKTCANVMSMRANAI
Links
Other
DM
family TFs
Other
Pristionchus exspectatus
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI080327
Acyrthosiphon pisum
ACYPI080327
N
0.000
GB49391
Apis mellifera
GB49391
N
0.000
ACEP23317
Atta cephalotes
ACEP23317
N
0.000
Cflo_11889--XP_393650.3_APIME
Camponotus floridanus
Cflo_11889--XP_393650.3_APIME
N
0.000
CLEC012742
Cimex lectularius
CLEC012742
N
0.000
YQE_05911
Dendroctonus ponderosae
YQE_05911
N
0.000
Hsal_12092--XP_393650.3_APIME
Harpegnathos saltator
Hsal_12092--XP_393650.3_APIME
N
0.000
ENSMMUG00000006501
Macaca mulatta
ENSMMUG00000006501
I
0.000
PHUM368740
Pediculus humanus
PHUM368740
N
0.000
SINV15126
Solenopsis invicta
SINV15126
N
0.000
SMAR004709
Strigamia maritima
SMAR004709
N
0.000
tetur02g02160
Tetranychus urticae
tetur02g02160
N
0.000
TC015354
Tribolium castaneum
TC015354
N
0.000
L798_10085
Zootermopsis nevadensis
L798_10085
N
0.000