CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh1_pg.scaffold_34000172
(
Physcomitrella patens
)
Dof
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02701 (zf-Dof)
IPR003851
fgenesh1_pg.scaffold_34000172
T171542_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.scaffold_34000172
Dof
9
52
LSKTCTKCGSINNCKYRYLNNGKKDQPRYQCLACKAFFSHILHG
fgenesh1_pg.scaffold_34000172
Dof
73
112
IDKTCTKCNELNNARFLYYNNKSRSQPRFQCLECQQQFQF
Links
Other
Dof
family TFs
Other
Physcomitrella patens
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OB01G27410
Oryza brachyantha
OB01G27410
N
ORGLA01G0146200
Oryza glaberrima
ORGLA01G0146200
N
ORGLA11G0204600
Oryza glaberrima
ORGLA11G0204600
N
OS01G0518400
Oryza sativa
OS01G0518400
N