CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G148506
(
Zea mays
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02319 (E2F_TDP)
IPR003316
GRMZM2G148506
T173154_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
efl-2
M01966_2.00
Caenorhabditis elegans
NDBGCGSBNN
NNVSCGCVHN
PBM
Weirauch et al.(2014)
pTH5916
0.431
0.431
efl-2
M00662_2.00
Caenorhabditis elegans
NSGCGSNNDN
NHNNSCGCSN
PBM
Narasimhan et al.(2015)
pTH9173
0.431
0.431
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G148506_P01
E2F
137
187
LLKTELTSFMVLYNRDNVESIGLDEAAKCLGVERRRIYDIVNVLEGVGHVA
GRMZM2G148506_P02
E2F
136
194
VYLSKQIFMVLYNRDNVESIGLDEAAKCLGVERRRIYDIVNVLEGVGIQQEDIVAFYWS
Links
Other
E2F
family TFs
Other
Zea mays
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGUG_01639
Meyerozyma guilliermondii
PGUG_01639
N
0.000