OB10G18700 (Oryza brachyantha)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02319 (E2F_TDP) IPR003316 OB10G18700 T173309_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFDP1
M08108_2.00 		Homo sapiens
NSGCGGGAAVN
NBTTCCCGCSN		 ChIP-seq
Mathelier et al.(2014)
MA1122.1 		0.779 0.779
TFDP1
M09035_2.00 		Homo sapiens
VRDDGGCGGGAMDN
NHKTCCCGCCHHYB		 Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C 		0.779 0.779
dpl-1
M09525_2.00 		Caenorhabditis elegans
GCGCGYHW
WDRCGCGC		 Misc
Heinz et al.(2010)
cElegans-Adult_modEncode 		0.721 0.721
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB10G18700.1 E2F 79 167

Links

Other E2F family TFs
Other Oryza brachyantha TFs

553 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_022_00282 Aquilegia coerulea Aquca_022_00282 I 0.000
BRADI2G24790 Brachypodium distachyon BRADI2G24790 N 0.000
LPERR05G13650 Leersia perrieri LPERR05G13650 N 0.000
cassava2513.valid.m1 Manihot esculenta cassava2513.valid.m1 I 0.000
cassava2514.valid.m1 Manihot esculenta cassava2514.valid.m1 I 0.000
cassava2515.valid.m1 Manihot esculenta cassava2515.valid.m1 I 0.000
cassava43226.valid.m1 Manihot esculenta cassava43226.valid.m1 N 0.000
cassava43227.valid.m1 Manihot esculenta cassava43227.valid.m1 N 0.000
mgf025137m Mimulus guttatus mgf025137m N 0.000
GSMUA_Achr10G04530_001 Musa acuminata GSMUA_Achr10G04530_001 N 0.000
OBART05G17230 Oryza barthii OBART05G17230 N 0.000
OB05G25040 Oryza brachyantha OB05G25040 N 0.000
ORGLA05G0148600 Oryza glaberrima ORGLA05G0148600 N 0.000
OGLUM05G18240 Oryza glumaepatula OGLUM05G18240 N 0.000
BGIOSGA018023 Oryza indica BGIOSGA018023 N 0.000
OMERI05G14890 Oryza meridionalis OMERI05G14890 N 0.000
ONIVA05G17930 Oryza nivara ONIVA05G17930 N 0.000
OPUNC05G15090 Oryza punctata OPUNC05G15090 N 0.000
ORUFI05G18410 Oryza rufipogon ORUFI05G18410 N 0.000
OS05G0426200 Oryza sativa OS05G0426200 N 0.000
Pavir.J02083 Panicum virgatum Pavir.J02083 N 0.000
Pavir.J07259 Panicum virgatum Pavir.J07259 N 0.000
Pavir.J18990 Panicum virgatum Pavir.J18990 N 0.000
Si001354m.g Setaria italica Si001354m.g N 0.000
Sb09g020880 Sorghum bicolor Sb09g020880 N 0.000
Traes_5AL_41B98AAEF Triticum aestivum Traes_5AL_41B98AAEF N 0.000
Traes_1DL_F410CF9FD Triticum aestivum Traes_1DL_F410CF9FD N 0.000
Traes_1BL_9018AA7BA Triticum aestivum Traes_1BL_9018AA7BA N 0.000
Traes_1AL_C4FA8404A Triticum aestivum Traes_1AL_C4FA8404A N 0.000
TRIUR3_22935 Triticum urartu TRIUR3_22935 N 0.000
GRMZM2G456568 Zea mays GRMZM2G456568 N 0.000
GRMZM2G104400 Zea mays GRMZM2G104400 N 0.000