Sb09g000900 (Sorghum bicolor)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02319 (E2F_TDP) IPR003316 Sb09g000900 T173458_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFDP1
M08108_2.00 		Homo sapiens
NSGCGGGAAVN
NBTTCCCGCSN		 ChIP-seq
Mathelier et al.(2014)
MA1122.1 		0.691 0.691
TFDP1
M09035_2.00 		Homo sapiens
VRDDGGCGGGAMDN
NHKTCCCGCCHHYB		 Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C 		0.691 0.691
dpl-1
M09525_2.00 		Caenorhabditis elegans
GCGCGYHW
WDRCGCGC		 Misc
Heinz et al.(2010)
cElegans-Adult_modEncode 		0.632 0.632
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb09g000900.1 E2F 70 157

Links

Other E2F family TFs
Other Sorghum bicolor TFs

555 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HpaG808968 Hyaloperonospora arabidopsidis HpaG808968 N
estExt_fgenesh1_kg.C_30200002 Phytophthora capsici estExt_fgenesh1_kg.C_30200002 N
PITG_09816 Phytophthora infestans PITG_09816 N
fgenesh_scip_prom.46568.10829 Phytophthora kernoviae fgenesh_scip_prom.46568.10829 N
F443_05590 Phytophthora parasitica F443_05590 N
Phyra84742 Phytophthora ramorum Phyra84742 N
maker-pag1_scaffold_161-snap-gene-0.10 Pythium aphanidermatum maker-pag1_scaffold_161-snap-gene-0.10 N
maker-par_contig_1598-fgenesh-gene-0.1 Pythium arrhenomanes maker-par_contig_1598-fgenesh-gene-0.1 N
maker-pir_contig_219-fgenesh-gene-0.10 Pythium irregulare maker-pir_contig_219-fgenesh-gene-0.10 N
fgenesh_masked-piw_contig_88-abinit-gene-0.43 Pythium iwayamai fgenesh_masked-piw_contig_88-abinit-gene-0.43 N
PYU1_G001927 Pythium ultimum PYU1_G001927 N
maker-pve_contig_855-fgenesh-gene-0.1 Pythium vexans maker-pve_contig_855-fgenesh-gene-0.1 N
SPRG_03788 Saprolegnia parasitica SPRG_03788 N