CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Contig17782.0.g92
(
Oxytricha trifallax
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02319 (E2F_TDP)
IPR003316
Contig17782.0.g92
T174040_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Contig17782.0.g92
E2F
165
239
ENKKLVFLSKKVLEEVSTKHETTGTNIANHILEIYKERNMKLDFKNVQRRVYDALNVLSALDVITKDRNKITFKG
Links
Other
E2F
family TFs
Other
Oxytricha trifallax
TFs
166 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI000672
Acyrthosiphon pisum
ACYPI000672
I
0.500
ACYPI066865
Acyrthosiphon pisum
ACYPI066865
I
0.500
F775_18467
Aegilops tauschii
F775_18467
I
0.456
F775_24235
Aegilops tauschii
F775_24235
I
0.441
ALNC14_015160
Albugo laibachii
ALNC14_015160
I
0.441
AMTR_s00077p00037200
Amborella trichopoda
AMTR_s00077p00037200
I
0.441
AMTR_s00161p00047190
Amborella trichopoda
AMTR_s00161p00047190
I
0.456
Aquca_030_00076
Aquilegia coerulea
Aquca_030_00076
I
0.441
Aquca_062_00025
Aquilegia coerulea
Aquca_062_00025
I
0.441
DPB
Arabidopsis lyrata
fgenesh2_kg.6__250__AT5G03415.1
I
0.441
DPB
Arabidopsis thaliana
AT5G03415
I
0.441
Bostr.2128s0112
Boechera stricta
Bostr.2128s0112
I
0.441
BGIBMGA006232
Bombyx mori
BGIBMGA006232
I
0.441
BRADI1G74890
Brachypodium distachyon
BRADI1G74890
I
0.456
BRADI3G27520
Brachypodium distachyon
BRADI3G27520
I
0.471
Bo2g004050
Brassica oleracea
Bo2g004050
I
0.441
Bo9g181990
Brassica oleracea
Bo9g181990
I
0.441
Bra009530
Brassica rapa
Bra009530
I
0.441
PK09434.1
Cannabis sativa
PK09434.1
I
0.456
PK10877.1
Cannabis sativa
PK10877.1
I
0.550
Cagra.4354s0002
Capsella grandiflora
Cagra.4354s0002
I
0.441
Carubv10001164m.g
Capsella rubella
Carubv10001164m.g
I
0.441
evm.TU.contig_32800
Carica papaya
evm.TU.contig_32800
I
0.441
gw1.2.505.1
Chlorella NC64A
gw1.2.505.1
I
0.456
estExt_fgeneshCV_pg.C_10474
Chlorella vulgaris
estExt_fgeneshCV_pg.C_10474
I
0.471
Ca_11214
Cicer arietinum
Ca_11214
I
0.456
Ca_11215
Cicer arietinum
Ca_11215
I
0.456
Cla001134
Citrullus lanatus
Cla001134
I
0.456
Ciclev10012088m.g
Citrus clementina
Ciclev10012088m.g
I
0.456
orange1.1g018827m.g
Citrus sinensis
orange1.1g018827m.g
I
0.456
estExt_Genemark1.C_10169
Coccomyxa subellipsoidea C169
estExt_Genemark1.C_10169
I
0.471
Cucsa.397930
Cucumis sativus
Cucsa.397930
I
0.492
DME_0000497501
Dracunculus medinensis
DME_0000497501
I
0.486
GF11948
Drosophila ananassae
FBgn0088987
I
0.456
GG20367
Drosophila erecta
FBgn0112558
I
0.456
GH20730
Drosophila grimshawi
FBgn0128193
I
0.456
Dp
Drosophila melanogaster
FBgn0011763
I
0.456
GI20813
Drosophila mojavensis
FBgn0143548
I
0.456
GA18332
Drosophila pseudoobscura
FBgn0078337
I
0.456
GM21454
Drosophila sechellia
FBgn0176335
I
0.456
GD10952
Drosophila simulans
FBgn0182715
I
0.456
GJ20546
Drosophila virilis
FBgn0207686
I
0.456
GK22007
Drosophila willistoni
FBgn0223992
I
0.456
GE12526
Drosophila yakuba
FBgn0230263
I
0.456
Eucgr.A01674
Eucalyptus grandis
Eucgr.A01674
I
0.456
Thhalv10014118m.g
Eutrema salsugineum
Thhalv10014118m.g
I
0.441
gene12582-v1.0-hybrid
Fragaria vesca
gene12582-v1.0-hybrid
I
0.456
estExt_Genewise1.C_70441
Fragilariopsis cylindrus
estExt_Genewise1.C_70441
I
0.475
GLYMA01G43800
Glycine max
GLYMA01G43800
I
0.456
GLYMA11G01270
Glycine max
GLYMA11G01270
I
0.456
Gorai.002G247000
Gossypium raimondii
Gorai.002G247000
I
0.456
Gorai.006G163100
Gossypium raimondii
Gorai.006G163100
I
0.456
GUITHDRAFT_133922
Guillardia theta
GUITHDRAFT_133922
I
0.441
MLOC_79152
Hordeum vulgare
MLOC_79152
I
0.479
HpaG800423
Hyaloperonospora arabidopsidis
HpaG800423
I
0.456
LPERR03G03690
Leersia perrieri
LPERR03G03690
I
0.441
Lus10014423.g
Linum usitatissimum
Lus10014423.g
I
0.471
Lus10022620.g
Linum usitatissimum
Lus10022620.g
I
0.471
Lus10023926.g
Linum usitatissimum
Lus10023926.g
I
0.471
LjSGA_030786.1
Lotus japonicus
LjSGA_030786.1
I
0.524
LCUP009030
Lucilia cuprina
LCUP009030
I
0.456
MDP0000150153
Malus domestica
MDP0000150153
I
0.438
MDP0000316055
Malus domestica
MDP0000316055
I
0.456
cassava23535.valid.m1
Manihot esculenta
cassava23535.valid.m1
I
0.471
cassava31269.valid.m1
Manihot esculenta
cassava31269.valid.m1
I
0.471
MTR_4g077797
Medicago truncatula
MTR_4g077797
I
0.456
MTR_4g077803
Medicago truncatula
MTR_4g077803
I
0.456
augustus_masked-nMf.1.1.scaf26567-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf26567-processed-gene-0.0
I
0.459
augustus_masked-nMf.1.1.scaf34489-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf34489-processed-gene-0.0
I
0.459
EuGene.0000040347
Micromonas pusilla
EuGene.0000040347
I
0.500
fgenesh2_pg.C_Chr_02000142
Micromonas sp RCC299
fgenesh2_pg.C_Chr_02000142
I
0.471
mgf001458m
Mimulus guttatus
mgf001458m
I
0.456
mgf003834m
Mimulus guttatus
mgf003834m
I
0.456
estExt_fgeneshMC_pg.C_21302
Mucor circinelloides
estExt_fgeneshMC_pg.C_21302
I
0.456
GSMUA_Achr1G00430_001
Musa acuminata
GSMUA_Achr1G00430_001
I
0.456
GSMUA_Achr5G12510_001
Musa acuminata
GSMUA_Achr5G12510_001
I
0.441
MDOA008269
Musca domestica
MDOA008269
I
0.456
fgeneshHS_pg.scaffold_39000098
Naegleria gruberi
fgeneshHS_pg.scaffold_39000098
I
0.471
Ogr00419
Ophisaurus gracilis
Ogr00419
I
0.486
OBART03G04060
Oryza barthii
OBART03G04060
I
0.441
OBART10G11350
Oryza barthii
OBART10G11350
I
0.456
OB03G14110
Oryza brachyantha
OB03G14110
I
0.441
OB10G18700
Oryza brachyantha
OB10G18700
I
0.456
ORGLA03G0038000
Oryza glaberrima
ORGLA03G0038000
I
0.441
ORGLA10G0100200
Oryza glaberrima
ORGLA10G0100200
I
0.456
OGLUM10G11120
Oryza glumaepatula
OGLUM10G11120
I
0.456
BGIOSGA011873
Oryza indica
BGIOSGA011873
I
0.441
BGIOSGA031841
Oryza indica
BGIOSGA031841
I
0.456
OLONG_008291
Oryza longistaminata
OLONG_008291
I
0.509
OLONG_012861
Oryza longistaminata
OLONG_012861
I
0.492
OMERI10G08380
Oryza meridionalis
OMERI10G08380
I
0.492
ONIVA10G10530
Oryza nivara
ONIVA10G10530
I
0.456
OPUNC03G03730
Oryza punctata
OPUNC03G03730
I
0.441
OPUNC10G09700
Oryza punctata
OPUNC10G09700
I
0.456
ORUFI10G11860
Oryza rufipogon
ORUFI10G11860
I
0.456
OS10G0440100
Oryza sativa
OS10G0440100
I
0.456
OSTLU_38105
Ostreococcus lucimarinus
OSTLU_38105
I
0.456
fgenesh1_pm.chr_10_#_45
Ostreococcus RCC809
fgenesh1_pm.chr_10_#_45
I
0.471
e_gw1.10.00.278.1
Ostreococcus tauri
e_gw1.10.00.278.1
I
0.441
Contig11543.0.0.g87
Oxytricha trifallax
Contig11543.0.0.g87
I
0.672
Contig8006.0.0.g35
Oxytricha trifallax
Contig8006.0.0.g35
I
0.672
Pavir.Ia04201
Panicum virgatum
Pavir.Ia04201
I
0.471
Pavir.Ib00301
Panicum virgatum
Pavir.Ib00301
I
0.471
Pavir.J03431
Panicum virgatum
Pavir.J03431
I
0.441
PTRK_0000381000
Parastrongyloides trichosuri
PTRK_0000381000
I
0.441
PDK_20s1399251g001
Phoenix dactylifera
PDK_20s1399251g001
I
0.465
PDK_20s1414621g001
Phoenix dactylifera
PDK_20s1414621g001
I
0.456
fgeneshPB_pg.16__301
Phycomyces blakesleeanus
fgeneshPB_pg.16__301
I
0.441
e_gw1.37.234.1
Physcomitrella patens
e_gw1.37.234.1
I
0.456
e_gw1.74.211.1
Physcomitrella patens
e_gw1.74.211.1
I
0.456
estExt_gwp_gw1.C_2190085
Physcomitrella patens
estExt_gwp_gw1.C_2190085
I
0.458
estExt_fgenesh1_pg.C_85250001
Phytophthora capsici
estExt_fgenesh1_pg.C_85250001
I
0.441
PITG_20195
Phytophthora infestans
PITG_20195
I
0.471
fgenesh_scip_prom.46568.5077
Phytophthora kernoviae
fgenesh_scip_prom.46568.5077
I
0.471
F443_09923
Phytophthora parasitica
F443_09923
I
0.471
Phyra95502
Phytophthora ramorum
Phyra95502
I
0.471
Physo155631
Phytophthora sojae
Physo155631
I
0.471
POPTR_0006s12620
Populus trichocarpa
POPTR_0006s12620
I
0.471
POPTR_0016s09640
Populus trichocarpa
POPTR_0016s09640
I
0.471
Pm019605
Prunus mume
Pm019605
I
0.456
PRUPE_ppa005481mg
Prunus persica
PRUPE_ppa005481mg
I
0.456
maker-pag1_scaffold_76-snap-gene-0.44
Pythium aphanidermatum
maker-pag1_scaffold_76-snap-gene-0.44
I
0.456
maker-par_contig_3316-snap-gene-0.4
Pythium arrhenomanes
maker-par_contig_3316-snap-gene-0.4
I
0.456
maker-pir_contig_483-fgenesh-gene-0.6
Pythium irregulare
maker-pir_contig_483-fgenesh-gene-0.6
I
0.471
maker-piw_contig_141-snap-gene-0.22
Pythium iwayamai
maker-piw_contig_141-snap-gene-0.22
I
0.471
PYU1_G008643
Pythium ultimum
PYU1_G008643
I
0.471
maker-pve_contig_507-snap-gene-0.12
Pythium vexans
maker-pve_contig_507-snap-gene-0.12
I
0.471
RSKR_0000798800
Rhabditophanes kr3021
RSKR_0000798800
I
0.485
GLOINDRAFT_340940
Rhizophagus irregularis
GLOINDRAFT_340940
I
0.471
30078.m002288
Ricinus communis
30078.m002288
I
0.471
O9G_005043
Rozella allomycis
O9G_005043
I
0.435
SapurV1A.0584s0010
Salix purpurea
SapurV1A.0584s0010
I
0.471
SapurV1A.1230s0050
Salix purpurea
SapurV1A.1230s0050
I
0.456
SELMODRAFT_129991
Selaginella moellendorffii
SELMODRAFT_129991
I
0.456
SELMODRAFT_80923
Selaginella moellendorffii
SELMODRAFT_80923
I
0.456
Si003799m.g
Setaria italica
Si003799m.g
I
0.456
Si036124m.g
Setaria italica
Si036124m.g
I
0.471
Solyc09g010670.2
Solanum lycopersicum
Solyc09g010670.2
I
0.483
Solyc10g078430.1
Solanum lycopersicum
Solyc10g078430.1
I
0.456
PGSC0003DMG400008373
Solanum tuberosum
PGSC0003DMG400008373
I
0.456
PGSC0003DMG401008915
Solanum tuberosum
PGSC0003DMG401008915
I
0.441
Sb01g046810
Sorghum bicolor
Sb01g046810
I
0.471
Sb03g031130
Sorghum bicolor
Sb03g031130
I
0.456
Sb05g024630
Sorghum bicolor
Sb05g024630
I
0.441
SPPG_00178
Spizellomyces punctatus
SPPG_00178
I
0.456
L893_g26776
Steinernema glaseri
L893_g26776
I
0.456
SPAL_0000874700
Strongyloides papillosus
SPAL_0000874700
I
0.441
SSTP_0000696800
Strongyloides stercoralis
SSTP_0000696800
I
0.441
SVE_0730800
Strongyloides venezuelensis
SVE_0730800
I
0.441
Thaps261479
Thalassiosira pseudonana
Thaps261479
I
0.478
TCM_021956
Theobroma cacao
TCM_021956
I
0.433
TCM_022240
Theobroma cacao
TCM_022240
I
0.456
TVAG_077130
Trichomonas vaginalis
TVAG_077130
I
0.438
TriadG32839
Trichoplax adhaerens
TriadG32839
I
0.441
Traes_3AL_D7DE23839
Triticum aestivum
Traes_3AL_D7DE23839
I
0.528
Traes_3DL_1E9DECCEA
Triticum aestivum
Traes_3DL_1E9DECCEA
I
0.528
Traes_4AS_491EF4D7F
Triticum aestivum
Traes_4AS_491EF4D7F
I
0.492
Traes_4BL_F7A02A7FD
Triticum aestivum
Traes_4BL_F7A02A7FD
I
0.492
Traes_4DL_AE039EE10
Triticum aestivum
Traes_4DL_AE039EE10
I
0.458
TRIUR3_33333
Triticum urartu
TRIUR3_33333
I
0.456
DPA
Vitis vinifera
VIT_08s0007g00170
I
0.463
VIT_08s0040g01330
Vitis vinifera
VIT_08s0040g01330
I
0.456
estExt_fgenesh5_synt.C_480006
Volvox carteri
estExt_fgenesh5_synt.C_480006
I
0.441
GRMZM2G063387
Zea mays
GRMZM2G063387
I
0.471
GRMZM2G086072
Zea mays
GRMZM2G086072
I
0.471
GRMZM2G462623
Zea mays
GRMZM2G462623
I
0.471