Sjc_0105380 (Schistosoma japonicum)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 Sjc_0105380 T174071_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
E2F4
M02961_2.00 		Homo sapiens
AATGGCGCCAAA
TTTGGCGCCATT		 SELEX
Jolma et al.(2013)
E2F4_1 		0.862 0.862
E2F4
M02962_2.00 		Homo sapiens
TTTGGCGCCAAA
TTTGGCGCCAAA		 SELEX
Jolma et al.(2013)
E2F4_2 		0.862 0.862
E2F4
M04707_2.00 		Homo sapiens
NWWKGGCGCCAAAW
WTTTGGCGCCMWWN		 SELEX
Yin et al.(2017)
E2F4_eDBD_HT-SELEX 		0.862 0.862
E2F4
M08109_2.00 		Homo sapiens
NSGCGGGARVN
NBYTCCCGCSN		 ChIP-seq
Mathelier et al.(2014)
MA0470.1 		0.862 0.862
E2F4
M07942_2.00 		Homo sapiens
SGCGSGARDNNBNVN
NBNVNNHYTCSCGCS		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F4_UCD 		0.862 0.862
E2F4
M07943_2.00 		Homo sapiens
SGCGGGARDNNBVVN
NBBVNNHYTCCCGCS		 ChIP-seq
Gerstein et al.(2012)
K562b_E2F4_UCD 		0.862 0.862
E2F4
M09036_2.00 		Homo sapiens
VDRGGCGGGRVND
HNBYCCCGCCYHB		 Misc
Kulakovskiy et al.(2013)
E2F4_HUMAN.H11MO.0.A 		0.862 0.862
E2f4
M09037_2.00 		Mus musculus
NRDDGGCGGGRMNN
NNKYCCCGCCHHYN		 Misc
Kulakovskiy et al.(2013)
E2F4_MOUSE.H11MO.0.A 		0.862 0.862
E2F4
M09524_2.00 		Homo sapiens
VGCGSGAADH
DHTTCSCGCB		 Misc
Heinz et al.(2010)
K562-E2F4_GSE31477 		0.862 0.862
E2F4
M10457_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F4_05 		0.862 0.862
E2F4
M10458_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F4_Q3 		0.862 0.862
E2F4
M10459_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F4_Q6 		0.862 0.862
E2f5
M09042_2.00 		Mus musculus
NGCGCSAAAN
NTTTSGCGCN		 Misc
Kulakovskiy et al.(2013)
E2F5_MOUSE.H11MO.0.B 		0.846 0.846
e_gw1.38.2.1
M01968_2.00 		Physcomitrella patens
NSGCGCBHHN
NDDVGCGCSN		 PBM
Weirauch et al.(2014)
pTH5707 		0.723 0.723
estExt_gwp_gw1.C_220046
M01225_2.00 		Physcomitrella patens
VGCGCBHHNN
NNDDVGCGCB		 PBM
Lambert et al.(2019)
pTH9809 		0.723 0.723
E2FC
M06870_2.00 		Arabidopsis thaliana
AWDDDGGCGCCAAAR
YTTTGGCGCCHHHWT		 Dap-seq
OMalley et al.(2016)
E2FC_col_a 		0.723 0.723
E2FA
M06871_2.00 		Arabidopsis thaliana
NDDDGGCGCCAWWW
WWWTGGCGCCHHHN		 Dap-seq
OMalley et al.(2016)
E2FA_col_a 		0.708 0.708
E2FA
M06872_2.00 		Arabidopsis thaliana
DDWDGGCGCCAWAD
HTWTGGCGCCHWHH		 Dap-seq
OMalley et al.(2016)
E2FA_colamp_a 		0.708 0.708
E2FA
M08106_2.00 		Arabidopsis thaliana
NVGCGCCAHN
NDTGGCGCBN		 ChIP-seq
Mathelier et al.(2014)
MA1414.1 		0.708 0.708
ENSACAG00000013716
M01960_2.00 		Anolis carolinensis
HNVGCGCBND
HNVGCGCBND		 PBM
Weirauch et al.(2014)
pTH9221 		0.692 0.692
E2F2
M01963_2.00 		Tupaia belangeri
WDVGCGCBHW
WDVGCGCBHW		 PBM
Weirauch et al.(2014)
pTH9291 		0.692 0.692
E2F3
M01964_2.00 		Taeniopygia guttata
NNSGCGCGMN
NKCGCGCSNN		 PBM
Weirauch et al.(2014)
pTH9288 		0.692 0.692
E2F2
M01961_2.00 		Homo sapiens
DNSGCGCSNH
DNSGCGCSNH		 PBM
Weirauch et al.(2014)
pTH9195 		0.677 0.677
E2f3
M00153_2.00 		Mus musculus
NNNNGCGSNN
NNSCGCNNNN		 PBM
Badis et al.(2009)
E2F3_3752 		0.677 0.677
E2f2
M00154_2.00 		Mus musculus
NDNNGCGSBN
NVSCGCNNHN		 PBM
Badis et al.(2009)
E2F2_1022 		0.677 0.677
ENSOANG00000014967
M01962_2.00 		Ornithorhynchus anatinus
NDSGCGCSHN
NDSGCGCSHN		 PBM
Weirauch et al.(2014)
pTH9382 		0.677 0.677
E2F2
M02949_2.00 		Homo sapiens
AAAAATGGCGCCAAAAWD
HWTTTTGGCGCCATTTTT		 SELEX
Jolma et al.(2013)
E2F2_1 		0.677 0.677
E2F2
M02950_2.00 		Homo sapiens
VDTTTTGGCGCCAAAAHN
NDTTTTGGCGCCAAAAHB		 SELEX
Jolma et al.(2013)
E2F2_2 		0.677 0.677
E2F2
M02951_2.00 		Homo sapiens
AAAWWGGCGCCAWTTT
AAAWTGGCGCCWWTTT		 SELEX
Jolma et al.(2013)
E2F2_3 		0.677 0.677
E2F3
M02956_2.00 		Homo sapiens
RAAAAKGGCGCCAAAANN
NNTTTTGGCGCCMTTTTY		 SELEX
Jolma et al.(2013)
E2F3_1 		0.677 0.677
E2F3
M02957_2.00 		Homo sapiens
DAAAADGGCGCCMWWTTY
RAAWWKGGCGCCHTTTTH		 SELEX
Jolma et al.(2013)
E2F3_2 		0.677 0.677
E2F3
M02958_2.00 		Homo sapiens
NDTTTTGGCGCCAAAABH
DVTTTTGGCGCCAAAAHN		 SELEX
Jolma et al.(2013)
E2F3_3 		0.677 0.677
E2F3
M04701_2.00 		Homo sapiens
DWTTTGGCGCCAAAWH
DWTTTGGCGCCAAAWH		 SELEX
Yin et al.(2017)
E2F3_eDBD_HT-SELEX 		0.677 0.677
E2F2
M04696_2.00 		Homo sapiens
GCGCGCGCSYW
WRSGCGCGCGC		 SELEX
Yin et al.(2017)
E2F2_eDBD_HT-SELEX_1 		0.677 0.677
E2F2
M04697_2.00 		Homo sapiens
NDWWDGGCGCCWWHWN
NWDWWGGCGCCHWWHN		 SELEX
Yin et al.(2017)
E2F2_eDBD_HT-SELEX_2 		0.677 0.677
E2F2
M09029_2.00 		Homo sapiens
GGCGCGMAWC
GWTKCGCGCC		 Misc
Kulakovskiy et al.(2013)
E2F2_HUMAN.H11MO.0.B 		0.677 0.677
E2F3
M09031_2.00 		Homo sapiens
NDGGCGGGAAR
YTTCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F3_HUMAN.H11MO.0.A 		0.677 0.677
E2f2
M09039_2.00 		Mus musculus
GGCGCGMAWC
GWTKCGCGCC		 Misc
Kulakovskiy et al.(2013)
E2F2_MOUSE.H11MO.0.B 		0.677 0.677
E2f3
M09038_2.00 		Mus musculus
DSGCGGGARV
BYTCCCGCSH		 Misc
Kulakovskiy et al.(2013)
E2F3_MOUSE.H11MO.0.A 		0.677 0.677
E2F3
M10454_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F1_Q6_01 		0.677 0.677
E2F3
M10455_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F3_Q6 		0.677 0.677
E2F3
M04702_2.00 		Homo sapiens
DTTTTGGCGCCAAAAH
DTTTTGGCGCCAAAAH		 SELEX
Yin et al.(2017)
E2F3_eDBD_Methyl-HT-SELEX 		0.677 0.677
E2F2
M04698_2.00 		Homo sapiens
SGBGSGCGCGS
SCGCGCSCVCS		 SELEX
Yin et al.(2017)
E2F2_eDBD_Methyl-HT-SELEX_1 		0.677 0.677
E2F2
M04699_2.00 		Homo sapiens
DWWWDGGCGCCAAAWH
DWTTTGGCGCCHWWWH		 SELEX
Yin et al.(2017)
E2F2_eDBD_Methyl-HT-SELEX_2 		0.677 0.677
efl-1
M08110_2.00 		Caenorhabditis elegans
HNHNSGCGSSAAWWN
NWWTTSSCGCSNDND		 ChIP-seq
Mathelier et al.(2014)
MA0541.1 		0.662 0.662
efl-1
M08197_2.00 		Caenorhabditis elegans
BGCGSSAAWW
WWTTSSCGCV		 ChIP-seq
Contrino et al.(2012)
Mw140 		0.662 0.662
efl-1
M09526_2.00 		Caenorhabditis elegans
WGCAARYGCGCTCYA
TRGAGCGCRYTTGCW		 Misc
Heinz et al.(2010)
cElegans-L1-EFL1_modEncode 		0.662 0.662
E2f
M08196_2.00 		Drosophila melanogaster
AAWWBSSCGSCAA
TTGSCGSSVWWTT		 ChIP-seq
Contrino et al.(2012)
Mf10 		0.631 0.631
E2F1
M02952_2.00 		Homo sapiens
WWDGGCGCCAAW
WTTGGCGCCHWW		 SELEX
Jolma et al.(2013)
E2F1_1 		0.615 0.615
E2F1
M02953_2.00 		Homo sapiens
WWKGGCGCCWWW
WWWGGCGCCMWW		 SELEX
Jolma et al.(2013)
E2F1_2 		0.615 0.615
E2F1
M02954_2.00 		Homo sapiens
WWWKGGCGCCMWWW
WWWKGGCGCCMWWW		 SELEX
Jolma et al.(2013)
E2F1_3 		0.615 0.615
E2F1
M02955_2.00 		Homo sapiens
AAWKGGCGCCAWTW
WAWTGGCGCCMWTT		 SELEX
Jolma et al.(2013)
E2F1_4 		0.615 0.615
E2F1
M04700_2.00 		Homo sapiens
NWWWDGGCGCCAAAWH
DWTTTGGCGCCHWWWN		 SELEX
Yin et al.(2017)
E2F1_FL_HT-SELEX 		0.615 0.615
E2F1
M07938_2.00 		Homo sapiens
VRRVNRVGCGSGMDS
SHKCSCGCBYNBYYB		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F1_UCD 		0.615 0.615
E2F1
M09030_2.00 		Homo sapiens
NVNDGGCGGGARVN
NBYTCCCGCCHNBN		 Misc
Kulakovskiy et al.(2013)
E2F1_HUMAN.H11MO.0.A 		0.615 0.615
E2f1
M09041_2.00 		Mus musculus
NDDGGCGGGRVN
NBYCCCGCCHHN		 Misc
Kulakovskiy et al.(2013)
E2F1_MOUSE.H11MO.0.A 		0.615 0.615
E2F1
M09521_2.00 		Homo sapiens
NNGGCGGGAA
TTCCCGCCNN		 Misc
Heinz et al.(2010)
Hela-E2F1_GSE22478 		0.615 0.615
E2F1
M10444_2.00 		Homo sapiens
THVGCGCGAAAAHKR
YMDTTTTCGCGCBDA		 Transfac
Matys et al.(2006)
V$E2F_01 		0.615 0.615
E2F1
M10445_2.00 		Homo sapiens
BHKSGCGCSAAA
TTTSGCGCSMDV		 Transfac
Matys et al.(2006)
V$E2F_03 		0.615 0.615
E2F1
M10446_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F1_01 		0.615 0.615
E2F1
M10447_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F1_02 		0.615 0.615
E2F1
M10448_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F1_Q3_01 		0.615 0.615
E2F1
M10449_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F1_Q3 		0.615 0.615
E2F1
M10450_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F1_Q4_01 		0.615 0.615
E2F1
M10451_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F1_Q4_02 		0.615 0.615
E2F1
M10452_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F1_Q4 		0.615 0.615
E2F1
M10453_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F1_Q6 		0.615 0.615
GSPATT00020286001
M01965_2.00 		Paramecium tetraurelia
NNSGCGSBN
NVSCGCSNN		 PBM
Weirauch et al.(2014)
pTH5647 		0.585 0.585
E2F6
M08107_2.00 		Homo sapiens
DGGMGGGARVN
NBYTCCCKCCH		 ChIP-seq
Mathelier et al.(2014)
MA0471.1 		0.569 0.569
E2F6
M07939_2.00 		Homo sapiens
NDSGCGGGARV
BYTCCCGCSHN		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F6_UCD 		0.569 0.569
E2F6
M07940_2.00 		Homo sapiens
NDVGCGGGARV
BYTCCCGCBHN		 ChIP-seq
Gerstein et al.(2012)
K562b_E2F6_UCD 		0.569 0.569
E2F6
M07941_2.00 		Homo sapiens
NDSGCGGGARV
BYTCCCGCSHN		 ChIP-seq
Gerstein et al.(2012)
K562_E2F6_HudsonAlpha 		0.569 0.569
E2F6
M09034_2.00 		Homo sapiens
NRGGMGGGARRNN
NNYYTCCCKCCYN		 Misc
Kulakovskiy et al.(2013)
E2F6_HUMAN.H11MO.0.A 		0.569 0.569
E2f6
M09043_2.00 		Mus musculus
NDGGCGGGARVV
BBYTCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F6_MOUSE.H11MO.0.A 		0.569 0.569
E2F6
M09523_2.00 		Homo sapiens
VGCGGGARNN
NNYTCCCGCB		 Misc
Heinz et al.(2010)
Hela-E2F6_GSE31477 		0.569 0.569
E2F6
M10456_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2F6_01 		0.569 0.569
E2F
M01959_2.00 		Dictyostelium discoideum
NNGSGCGCSHN
NDSGCGCSCNN		 PBM
Weirauch et al.(2014)
pTH5403 		0.554 0.554
estExt_gwp_GeneWisePlus.C_Chr_02.00010270
M01969_2.00 		Ostreococcus tauri
HRVGCGCCNN
NNGGCGCBYD		 PBM
Weirauch et al.(2014)
pTH5701 		0.538 0.538
efl-2
M01966_2.00 		Caenorhabditis elegans
NDBGCGSBNN
NNVSCGCVHN		 PBM
Weirauch et al.(2014)
pTH5916 		0.446 0.446
efl-2
M00662_2.00 		Caenorhabditis elegans
NSGCGSNNDN
NHNNSCGCSN		 PBM
Narasimhan et al.(2015)
pTH9173 		0.446 0.446
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CPRT0000009916 E2F 25 90

Links

Other E2F family TFs
Other Schistosoma japonicum TFs

1042 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_28577 Aegilops tauschii F775_28577 I 0.000
anac071 Arabidopsis lyrata Al_scaffold_0007_2395 I 0.000
anac096 Arabidopsis lyrata fgenesh2_kg.8__135__AT5G46590.1 I 0.000
anac071 Arabidopsis thaliana AT4G17980 D 0.000
anac096 Arabidopsis thaliana AT5G46590 D 0.000
Bostr.30275s0267 Boechera stricta Bostr.30275s0267 I 0.000
BRADI3G33957 Brachypodium distachyon BRADI3G33957 I 0.000
Bo1g019130 Brassica oleracea Bo1g019130 I 0.000
Bo2g130240 Brassica oleracea Bo2g130240 I 0.000
Bo7g075540 Brassica oleracea Bo7g075540 I 0.000
Bo7g105630 Brassica oleracea Bo7g105630 I 0.000
Bra012626 Brassica rapa Bra012626 I 0.000
Bra013272 Brassica rapa Bra013272 I 0.000
Bra022046 Brassica rapa Bra022046 I 0.000
Bra025012 Brassica rapa Bra025012 I 0.000
PK00339.1 Cannabis sativa PK00339.1 I 0.000
Cagra.0569s0030 Capsella grandiflora Cagra.0569s0030 I 0.000
Cagra.3356s0092 Capsella grandiflora Cagra.3356s0092 I 0.000
Carubv10007390m.g Capsella rubella Carubv10007390m.g I 0.000
Carubv10028284m.g Capsella rubella Carubv10028284m.g I 0.000
evm.TU.supercontig_90.52 Carica papaya evm.TU.supercontig_90.52 I 0.000
Ca_12837 Cicer arietinum Ca_12837 I 0.000
Ca_02274 Cicer arietinum Ca_02274 I 0.000
Cla016424 Citrullus lanatus Cla016424 I 0.000
Ciclev10031966m.g Citrus clementina Ciclev10031966m.g I 0.000
orange1.1g018835m.g Citrus sinensis orange1.1g018835m.g I 0.000
Cucsa.313350 Cucumis sativus Cucsa.313350 I 0.000
Eucgr.D02182 Eucalyptus grandis Eucgr.D02182 I 0.000
Eucgr.E00298 Eucalyptus grandis Eucgr.E00298 I 0.000
Thhalv10001200m.g Eutrema salsugineum Thhalv10001200m.g I 0.000
gene10722-v1.0-hybrid Fragaria vesca gene10722-v1.0-hybrid I 0.000
GLYMA17G16500 Glycine max GLYMA17G16500 I 0.000
GLYMA05G23840 Glycine max GLYMA05G23840 I 0.000
Gorai.007G031300 Gossypium raimondii Gorai.007G031300 I 0.000
Gorai.003G180600 Gossypium raimondii Gorai.003G180600 I 0.000
Gorai.008G227800 Gossypium raimondii Gorai.008G227800 I 0.000
Gorai.004G186700 Gossypium raimondii Gorai.004G186700 I 0.000
MLOC_58950 Hordeum vulgare MLOC_58950 I 0.000
LPERR10G15090 Leersia perrieri LPERR10G15090 I 0.000
Lus10030978.g Linum usitatissimum Lus10030978.g I 0.000
Lus10035373.g Linum usitatissimum Lus10035373.g I 0.000
MDP0000936269 Malus domestica MDP0000936269 I 0.000
cassava22941.valid.m1 Manihot esculenta cassava22941.valid.m1 I 0.000
MTR_5g014300 Medicago truncatula MTR_5g014300 I 0.000
MTR_4g098630 Medicago truncatula MTR_4g098630 I 0.000
GSMUA_Achr11G17780_001 Musa acuminata GSMUA_Achr11G17780_001 I 0.000
GSMUA_Achr5G03360_001 Musa acuminata GSMUA_Achr5G03360_001 I 0.000
OBART10G19230 Oryza barthii OBART10G19230 I 0.000
OB10G26350 Oryza brachyantha OB10G26350 I 0.000
ORGLA10G0144100 Oryza glaberrima ORGLA10G0144100 I 0.000
OGLUM10G19330 Oryza glumaepatula OGLUM10G19330 I 0.000
BGIOSGA033482 Oryza indica BGIOSGA033482 I 0.000
OLONG_018722 Oryza longistaminata OLONG_018722 I 0.000
OMERI07G08100 Oryza meridionalis OMERI07G08100 I 0.000
ONIVA10G21790 Oryza nivara ONIVA10G21790 I 0.000
OPUNC10G17630 Oryza punctata OPUNC10G17630 I 0.000
ORUFI10G20470 Oryza rufipogon ORUFI10G20470 I 0.000
Pavir.Ib02435 Panicum virgatum Pavir.Ib02435 I 0.000
Pavir.Ia03491 Panicum virgatum Pavir.Ia03491 I 0.000
POPTR_0001s02710 Populus trichocarpa POPTR_0001s02710 I 0.000
POPTR_0003s08830 Populus trichocarpa POPTR_0003s08830 I 0.000
Pm023277 Prunus mume Pm023277 I 0.000
PRUPE_ppa007828mg Prunus persica PRUPE_ppa007828mg I 0.000
29827.m002555 Ricinus communis 29827.m002555 I 0.000
SapurV1A.0846s0080 Salix purpurea SapurV1A.0846s0080 I 0.000
SapurV1A.0900s0060 Salix purpurea SapurV1A.0900s0060 I 0.000
Si036301m.g Setaria italica Si036301m.g I 0.000
Solyc06g061080.2 Solanum lycopersicum Solyc06g061080.2 I 0.000
Solyc08g077110.2 Solanum lycopersicum Solyc08g077110.2 I 0.000
PGSC0003DMG400017505 Solanum tuberosum PGSC0003DMG400017505 I 0.000
Sb01g028450 Sorghum bicolor Sb01g028450 I 0.000
TCM_015749 Theobroma cacao TCM_015749 I 0.000
Traes_1BL_8925B27BC Triticum aestivum Traes_1BL_8925B27BC I 0.000
Traes_1DL_A556D8590 Triticum aestivum Traes_1DL_A556D8590 N 0.000
TRIUR3_22131 Triticum urartu TRIUR3_22131 I 0.000
VIT_02s0012g01040 Vitis vinifera VIT_02s0012g01040 I 0.000
GRMZM2G082709 Zea mays GRMZM2G082709 I 0.000