ASU_04096 (Ascaris suum)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 ASU_04096 T174226_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
E2F8
M02959_2.00 		Homo sapiens
TTTGGCGGGAAA
TTTCCCGCCAAA		 SELEX
Jolma et al.(2013)
E2F8_1 		0.467 0.467
E2F8
M04703_2.00 		Homo sapiens
WDKTGGCGGGARNN
NNYTCCCGCCAMHW		 SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX 		0.467 0.467
E2F8
M04704_2.00 		Homo sapiens
WTTTGGCGGGAAWN
NWTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX 		0.467 0.467
E2F7
M02960_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Jolma et al.(2013)
E2F7_1 		0.452 0.452
E2F7
M04705_2.00 		Homo sapiens
WTTTGGCGGGAAAN
NTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX 		0.452 0.452
E2F7
M09033_2.00 		Homo sapiens
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B 		0.452 0.452
E2f7
M09040_2.00 		Mus musculus
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C 		0.452 0.452
E2F7
M09522_2.00 		Homo sapiens
NSGCGSGAAMNN
NNKTTCSCGCSN		 Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673 		0.452 0.452
E2F7
M04706_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX 		0.452 0.452
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ASU_04096 E2F 176 242
ASU_04096 E2F 346 429

Links

Other E2F family TFs
Other Ascaris suum TFs

194 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_34.221 Carica papaya evm.TU.supercontig_34.221 N
Ca_10228 Cicer arietinum Ca_10228 N
Cla011265 Citrullus lanatus Cla011265 N
Ciclev10016383m.g Citrus clementina Ciclev10016383m.g N
orange1.1g025739m.g Citrus sinensis orange1.1g025739m.g N
Cucsa.142580 Cucumis sativus Cucsa.142580 N
GLYMA20G10600 Glycine max GLYMA20G10600 N
GLYMA13G03880 Glycine max GLYMA13G03880 N
Gorai.013G266400 Gossypium raimondii Gorai.013G266400 N
MTR_5g088230 Medicago truncatula MTR_5g088230 N
mgf016309m Mimulus guttatus mgf016309m N
POPTR_0001s22790 Populus trichocarpa POPTR_0001s22790 N
Pm001671 Prunus mume Pm001671 N
PRUPE_ppa022266mg Prunus persica PRUPE_ppa022266mg N
SapurV1A.0977s0060 Salix purpurea SapurV1A.0977s0060 N
SapurV1A.1066s0010 Salix purpurea SapurV1A.1066s0010 N
SapurV1A.1951s0040 Salix purpurea SapurV1A.1951s0040 N
SapurV1A.3860s0010 Salix purpurea SapurV1A.3860s0010 N
Solyc01g008980.2 Solanum lycopersicum Solyc01g008980.2 N
PGSC0003DMG400022706 Solanum tuberosum PGSC0003DMG400022706 N
TCM_042034 Theobroma cacao TCM_042034 N
VIT_06s0009g01790 Vitis vinifera VIT_06s0009g01790 N